RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CMTM7Q96FZ5 175 aa14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 FAM120CQ9NX05 1096 aaKnown RBP14.94□□□□□ -0.02
PCDHA3-202ENST00000532566 RB1P06400 928 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 SRPRAP08240 638 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 FPGSQ05932 587 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 GRIK2Q13002 908 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 LARS2Q15031 903 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ANGPT1Q15389 498 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 TNFAIP8L3Q5GJ75 292 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 OR2T5Q6IEZ7 315 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ALKAL1Q6UXT8 129 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 PARGQ86W56 976 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ARHGAP12Q8IWW6 846 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 OR2T29Q8NH02 315 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 UBASH3BQ8TF42 649 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 DEPDC7Q96QD5 511 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 DNAJC15Q9Y5T4 150 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 CREG1O75629 220 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 LAMP2P13473 410 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 MAT2AP31153 395 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 C1QTNF8P60827 252 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 TAB1Q15750 504 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 KDELC1Q6UW63 502 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 C7orf61Q8IZ16 206 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 GJD3Q8N144 294 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HERVK_113Q902F9 699 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC35G5Q96KT7 338 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 BRINP2Q9C0B6 783 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 AURKAO14965 403 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 TP73O15350 636 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 LATS1O95835 1130 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 DNAJA1P31689 397 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 STXBP1P61764 594 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 KLHL12Q53G59 568 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 PLEKHS1Q5SXH7 462 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 FAM91A1Q658Y4 838 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 NUDT13Q86X67 352 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 IRF7Q92985 503 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 RAB11FIP5Q9BXF6 653 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 WDR26Q9H7D7 661 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 AIG1Q9NVV5 245 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 MAT2BQ9NZL9 334 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 CALML5Q9NZT1 146 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 USP3Q9Y6I4 520 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 RASGRP1O95267 797 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HIST1H2ABP04908 130 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 TCF3P15923 654 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 PSMA1P25786 263 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 TPP2P29144 1249 aaPredicted RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 BDKRB1P46663 353 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 OR4D1Q15615 310 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF789Q5FWF6 425 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 DPY19L3Q6ZPD9 716 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HIST3H2AQ7L7L0 130 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 OXR1Q8N573 874 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 KLK6Q92876 244 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HIST1H2ACQ93077 130 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 COPS4Q9BT78 406 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ZCCHC3Q9NUD5 404 aaKnown RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ZNF624Q9P2J8 865 aaPredicted RBP14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 ADAMTS6Q9UKP5 1117 aa14.93□□□□□ -0.02
PCDHA3-202ENST00000532566 HTRA2O43464 458 aaPredicted RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 AP2A2O94973 939 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 STK19P49842 368 aaPredicted RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 SCARB2Q14108 478 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 RBM48Q5RL73 367 aaKnown RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 KLHL23Q8NBE8 558 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 AP3S1Q92572 193 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC45A3Q96JT2 553 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 SLC35A5Q9BS91 424 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 SPRTNQ9H040 489 aaPredicted RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 MIR1-1HGQ9H1L0 117 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 NME6O75414 186 aaPredicted RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 CDH3P22223 829 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 CCR8P51685 355 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 CASP9P55211 416 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 PTGR1Q14914 329 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 ZBED5Q49AG3 693 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 LRRTM4Q86VH4 590 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 GPR65Q8IYL9 337 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 ANKRD49Q8WVL7 239 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 C1GALT1C1Q96EU7 318 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 KAT8Q9H7Z6 458 aaKnown RBP14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 TPT1P8Q9HAU6 139 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 KCNK13Q9HB14 408 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 PTGDR2Q9Y5Y4 395 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 STRCQ7RTU9 1775 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 EDDM13A0A1B0GTR0 161 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 PRSS51A0A1B0GVH4 220 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 A0A1B0GW55 424 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 TMEM189-UBE2V1I3L0A0 370 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 AIREO43918 545 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 DUX4L2P0CJ85 424 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 DUX4L3P0CJ86 424 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 DUX4L4P0CJ87 422 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 DUX4L5P0CJ88 424 aa14.92□□□□□ -0.02
PCDHA3-202ENST00000532566 DUX4L6P0CJ89 424 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms