RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 RAB40ALP0C0E4 278 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 FAM87AP0C7U9 286 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 MCM3P25205 808 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 PSMB5P28074 263 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 GRIA3P42263 894 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 RGS4P49798 205 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 FASTKQ14296 549 aaKnown RBP22.08■■□□□ 1.13
CAPN1-222ENST00000532285 NAA25Q14CX7 972 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 DEFB109BQ30KR1 87 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 RBM20Q5T481 1227 aaKnown RBP22.08■■□□□ 1.13
CAPN1-222ENST00000532285 ATP1A1-AS1Q5TC04 95 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 DUPD1Q68J44 220 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 ZNF843Q8N446 348 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 OR2L3Q8NG85 312 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 EEF1AKMT1Q8WVE0 214 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 RUFY1Q96T51 708 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 MIPEPQ99797 713 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 NLNQ9BYT8 704 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 ADNPQ9H2P0 1102 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 IRAK4Q9NWZ3 460 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 SRPK3Q9UPE1 567 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 UTP11Q9Y3A2 253 aaKnown RBP22.08■■□□□ 1.13
CAPN1-222ENST00000532285 BOD1L1Q8NFC6 3051 aa22.08■■□□□ 1.13
CAPN1-222ENST00000532285 CCDC88CQ9P219 2028 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 AGXTP21549 392 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 PNLIPRP1P54315 467 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 CDKN2DP55273 166 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 MGAT5Q09328 741 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 FASTKD3Q14CZ7 662 aaKnown RBP22.07■■□□□ 1.12
CAPN1-222ENST00000532285 LCN10Q6JVE6 187 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 RHBDD2Q6NTF9 364 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 UBE2R2Q712K3 238 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-222ENST00000532285 PIWIL4Q7Z3Z4 852 aaKnown RBP22.07■■□□□ 1.12
CAPN1-222ENST00000532285 SYVN1Q86TM6 617 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 SPNS2Q8IVW8 549 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 ZBED8Q8IZ13 594 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 C16orf45Q96MC5 204 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-222ENST00000532285 GEMIN8Q9NWZ8 242 aaKnown RBP22.07■■□□□ 1.12
CAPN1-222ENST00000532285 MOCS1Q9NZB8 636 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 ZFATQ9P243 1243 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 SLC17A6Q9P2U8 582 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 CFAP46Q8IYW2 2715 aa22.07■■□□□ 1.12
CAPN1-222ENST00000532285 SLC16A8O95907 504 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 SYF2O95926 243 aaKnown RBP22.06■■□□□ 1.12
CAPN1-222ENST00000532285 CMPK1P30085 196 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 RPA3P35244 121 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-222ENST00000532285 CKAP4Q07065 602 aaKnown RBP22.06■■□□□ 1.12
CAPN1-222ENST00000532285 PTCHD3Q3KNS1 767 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 PAQR3Q6TCH7 311 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 PALM2Q8IXS6 379 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 ZNF655Q8N720 491 aaPredicted RBP22.06■■□□□ 1.12
CAPN1-222ENST00000532285 PROKR1Q8TCW9 393 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 APOBEC4Q8WW27 367 aaKnown RBP22.06■■□□□ 1.12
CAPN1-222ENST00000532285 RAB17Q9H0T7 212 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 CDC23Q9UJX2 597 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 POLHQ9Y253 713 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 VWA7Q9Y334 891 aa22.06■■□□□ 1.12
CAPN1-222ENST00000532285 CDC14CA4D256 554 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 EIF3HO15372 352 aaKnown RBP eCLIP22.05■■□□□ 1.12
CAPN1-222ENST00000532285 C8GP07360 202 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 CAPN1P07384 714 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 CTSBP07858 339 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 FURINP09958 794 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 POLE2P56282 527 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 RPS18P62269 152 aaKnown RBP22.05■■□□□ 1.12
CAPN1-222ENST00000532285 UGT8Q16880 541 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 TCTE1Q5JU00 501 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 ZNF385CQ66K41 422 aaPredicted RBP22.05■■□□□ 1.12
CAPN1-222ENST00000532285 SUSD1Q6UWL2 747 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 MYO1HQ8N1T3 1032 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 ENDOVQ8N8Q3 282 aaKnown RBP22.05■■□□□ 1.12
CAPN1-222ENST00000532285 GPATCH11Q8N954 259 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 MCOLN3Q8TDD5 553 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 PYROXD1Q8WU10 500 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 ZNF480Q8WV37 535 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 DLG3Q92796 817 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 C17orf62Q9BQA9 187 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 NDC1Q9BTX1 674 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 ACAT2Q9BWD1 397 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 TXLNGQ9NUQ3 528 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 GRHL1Q9NZI5 618 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 TUBD1Q9UJT1 453 aa22.05■■□□□ 1.12
CAPN1-222ENST00000532285 MDC1Q14676 2089 aaKnown RBP22.05■■□□□ 1.12
CAPN1-222ENST00000532285 C9J4A7 227 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 E7ENX8 843 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 SRPX2O60687 465 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-222ENST00000532285 ARSFP54793 590 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 IL2P60568 153 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 CAV1Q03135 178 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 TAP2Q03519 686 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 PDAP1Q13442 181 aaKnown RBP22.04■■□□□ 1.12
CAPN1-222ENST00000532285 TSTA3Q13630 321 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-222ENST00000532285 HECTD2Q5U5R9 776 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 FAM45BPQ6NSW5 357 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 FAM198BQ6UWH4 519 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 SLC26A11Q86WA9 606 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 FAM45AQ8TCE6 357 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 SELENOSQ9BQE4 189 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 DPH7Q9BTV6 452 aa22.04■■□□□ 1.12
CAPN1-222ENST00000532285 MRPS30Q9NP92 439 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms