RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	SLC9A6	Q92581	669 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	RSC1A1	Q92681	617 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	CAVIN3	Q969G5	261 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	FUBP1	Q96AE4	644 aa	Known RBP	5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	CENPT	Q96BT3	561 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	RNF31	Q96EP0	1072 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	MED15	Q96RN5	788 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	EFHD1	Q9BUP0	239 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	DDA1	Q9BW61	102 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	ALOXE3	Q9BYJ1	711 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	TP63	Q9H3D4	680 aa	Predicted RBP	5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	SYNDIG1	Q9H7V2	258 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	GALNT9	Q9HCQ5	603 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	TBC1D23	Q9NUY8	699 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	SYBU	Q9NX95	663 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	CGN	Q9P2M7	1197 aa	Known RBP	5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	IPO11	Q9UI26	975 aa	Known RBP	5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	PILRA	Q9UKJ1	303 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	ENTPD4	Q9Y227	616 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	HS3ST2	Q9Y278	367 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	OR51B4	Q9Y5P0	310 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	FADS3	Q9Y5Q0	445 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	RNF215	Q9Y6U7	377 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	APC	P25054	2843 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	ADGRG4	Q8IZF6	3080 aa		5.63	□□□□□ -1.51
PUM1-222	ENST00000531867	PCSK5	Q92824	1860 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	FBN3	Q75N90	2809 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SVIL	O95425	2214 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	NAV3	Q8IVL0	2385 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TRIM64C	A6NLI5	447 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TCP11X1	B4DZS4	312 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	MKRN2OS	H3BPM6	223 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TULP2	O00295	520 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	HNRNPR	O43390	633 aa	Known RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	RAD1	O60671	282 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CLEC3B	P05452	202 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TPM2	P07951	284 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ELANE	P08246	267 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	QDPR	P09417	244 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	EGR2	P11161	476 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ZNF18	P17022	549 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SLC6A2	P23975	617 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ATP5F1	P24539	256 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	IL1R2	P27930	398 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	PAFAH1B1	P43034	410 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CYP2J2	P51589	502 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	PNLIPRP1	P54315	467 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	RAD23B	P54727	409 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TPD52	P55327	224 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	DAOA	P59103	153 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	MPP3	Q13368	585 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	EIF4EBP2	Q13542	120 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	NR1D2	Q14995	579 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ELOC	Q15369	112 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ERCC6L	Q2NKX8	1250 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	EIF2S3L	Q2VIR3	472 aa	Known RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	DEFB109B	Q30KR1	87 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	C1orf220	Q5T0J3	134 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CERCAM	Q5T4B2	595 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	B3GNTL1	Q67FW5	361 aa	Predicted RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	C11orf88	Q6PI97	169 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CNST	Q6PJW8	725 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	MACC1	Q6ZN28	852 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SZRD1	Q7Z422	152 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SLFN11	Q7Z7L1	901 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	PPP1R3B	Q86XI6	285 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	EPHX4	Q8IUS5	362 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CCDC65	Q8IXS2	484 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SLC4A11	Q8NBS3	891 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ASB10	Q8WXI3	467 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	IRGQ	Q8WZA9	623 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	RAB24	Q969Q5	203 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	HAPLN3	Q96S86	360 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	DMRTA2	Q96SC8	542 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	PRMT1	Q99873	361 aa	Known RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	ZSWIM1	Q9BR11	485 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	FEM1A	Q9BSK4	669 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	HGH1	Q9BTY7	390 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	MRPL46	Q9H2W6	279 aa	Known RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	SMURF2	Q9HAU4	748 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CNGB3	Q9NQW8	809 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	DMAC2	Q9NW81	257 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	NF1	P21359	2839 aa		5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	TNRC6A	Q8NDV7	1962 aa	Known RBP	5.62	□□□□□ -1.51
PUM1-222	ENST00000531867	CSMD2	Q7Z408	3487 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	IGHV5-10-1	A0A0J9YXX1	117 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	LOC101059948	A0A1B0GTJ6	334 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	IGLON5	A6NGN9	336 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867		M0QYT0	321 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	KPNA3	O00505	521 aa	Predicted RBP	5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	B4GAT1	O43505	415 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	NUDT21	O43809	227 aa	Known RBP	5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	ZNF821	O75541	412 aa	Predicted RBP	5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	B3GALNT1	O75752	331 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	CCNDBP1	O95273	360 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	CPNE6	O95741	557 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	HLA-DRA	P01903	254 aa		5.61	□□□□□ -1.51
PUM1-222	ENST00000531867	FYN	P06241	537 aa		5.61	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms