RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 OR14A16Q8NHC5 309 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 LMO3Q8TAP4 145 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 LRRC8CQ8TDW0 803 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 SLC38A5Q8WUX1 472 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 PHF21BQ96EK2 531 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 CSF3RQ99062 836 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 P2RY12Q9H244 342 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 SNX25Q9H3E2 840 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ACKR4Q9NPB9 350 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 INTS10Q9NVR2 710 aaKnown RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 P4HTMQ9NXG6 502 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 ACTR3BQ9P1U1 418 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 FZD10Q9ULW2 581 aa4.15□□□□□ -1.75
USP47-211ENST00000531513 SPIN1Q9Y657 262 aaPredicted RBP4.15□□□□□ -1.75
USP47-211ENST00000531513 DHX29Q7Z478 1369 aaKnown RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 A0A0U1RQJ8 604 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 A0A1B0GVT2 93 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 C5orf51A6NDU8 294 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PRR32B1ATL7 298 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 TMEM178BH3BS89 294 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 LINC01565O15544 149 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ATP6AP2O75787 350 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 SERPINI2O75830 405 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ZNF432O94892 652 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 GLCEO94923 617 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 GSRP00390 522 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ALPPP05187 535 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 HOXC6P09630 235 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 FAM200BP0CF97 657 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 IGHV4-30-4P0DP06 118 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ALPPL2P10696 532 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 NPBWR1P48145 328 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 POLR2FP61218 127 aaKnown RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 GFPT1Q06210 699 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 RUNX1T1Q06455 604 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 Q0VFX4 171 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PRKAA1Q13131 559 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
USP47-211ENST00000531513 PTPN14Q15678 1187 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PTGISQ16647 500 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 TMEM35AQ53FP2 167 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PRAMEF8Q5VWM4 474 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 C11orf63Q6NUN7 778 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 FAM122CQ6P4D5 195 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 LINGO4Q6UY18 593 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ZNF704Q6ZNC4 412 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 ARHGAP22Q7Z5H3 698 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 RNF113BQ8IZP6 322 aaKnown RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 APCDD1Q8J025 514 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 BMPERQ8N8U9 685 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 THAP8Q8NA92 274 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 CNNM3Q8NE01 707 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 RNF128Q8TEB7 428 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 SLC13A3Q8WWT9 602 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 FIG4Q92562 907 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PROX1Q92786 737 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ABTB1Q969K4 478 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 PHF21AQ96BD5 680 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 C16orf45Q96MC5 204 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 SLC2A11Q9BYW1 496 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 TM6SF1Q9BZW5 370 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 KRT23Q9C075 422 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 PRMT8Q9NR22 394 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 TMEM30AQ9NV96 361 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 HIF1ANQ9NWT6 349 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 ERRFI1Q9UJM3 462 aaPredicted RBP4.14□□□□□ -1.75
USP47-211ENST00000531513 ICAM5Q9UMF0 924 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 GPR132Q9UNW8 380 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 AMDHD2Q9Y303 409 aa4.14□□□□□ -1.75
USP47-211ENST00000531513 TRAV24A0A0B4J272 114 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ILVBLA1L0T0 632 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 CASTOR2A6NHX0 329 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 LILRA5A6NI73 299 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 OR6C75A6NL08 312 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 INAFM1C9JVW0 142 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 CACNB4O00305 520 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 ATP9AO75110 1047 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 GUCA1CO95843 209 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 HAPLN1P10915 354 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 CCNA2P20248 432 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 IL15P40933 162 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 IER3P46695 156 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 GPC3P51654 580 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ATXN3P54252 364 aaPredicted RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 CLDN15P56746 228 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 HSD17B7P56937 341 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ABATP80404 500 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 HTD2P86397 168 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 EEF1A2Q05639 463 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 ARHGAP1Q07960 439 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 DHX34Q14147 1143 aaKnown RBP4.13□□□□□ -1.75
USP47-211ENST00000531513 IFI44LQ53G44 452 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 EFHC1Q5JVL4 640 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 TRNP1Q6NT89 227 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 BTNL8Q6UX41 500 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 TOM1L2Q6ZVM7 507 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ZNF410Q86VK4 478 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 ANKRD46Q86W74 232 aa4.13□□□□□ -1.75
USP47-211ENST00000531513 PTOV1Q86YD1 416 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms