RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GPRIN2O60269 458 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 BBOX1O75936 387 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ATP1A3P13637 1013 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 HOXD10P28358 340 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 HPDP32754 393 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ZFP36L2P47974 494 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 BPIFB3P59826 476 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 HERV-K104P61576 105 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 TMF1P82094 1093 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 CD300CQ08708 224 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 LRRC74AQ0VAA2 488 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 SQLEQ14534 574 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 TNIP1Q15025 636 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 SYCP1Q15431 976 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 SLC25A53Q5H9E4 307 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 SPATA1Q5VX52 437 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 IRGCQ6NXR0 463 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 LINGO4Q6UY18 593 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 CEACAM19Q7Z692 300 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 CEP57L1Q8IYX8 460 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 GPD1LQ8N335 351 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 KLHL30-AS1Q8NEE0 82 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 GPRC5AQ8NFJ5 357 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 TDRD7Q8NHU6 1098 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 C11orf45Q8TAV5 145 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 RNF128Q8TEB7 428 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 USP6NLQ92738 828 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ZUFSPQ96AP4 578 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 MTERF3Q96E29 417 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 FAM81BQ96LP2 452 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ZMAT2Q96NC0 199 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 FNBP1Q96RU3 617 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 GAD1Q99259 594 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 NUDT16L1Q9BRJ7 211 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 TCHPQ9BT92 498 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 TEX13AQ9BXU3 409 aaPredicted RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 MED20Q9H944 212 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ZCCHC17Q9NP64 241 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 OLA1Q9NTK5 396 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 IRAK4Q9NWZ3 460 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 NDE1Q9NXR1 346 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 QPCTLQ9NXS2 382 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 NYAP2Q9P242 653 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 B4GALT7Q9UBV7 327 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ZMAT5Q9UDW3 170 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 POMT2Q9UKY4 750 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 CFAP45Q9UL16 551 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ITM2BQ9Y287 266 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 MRPL11Q9Y3B7 192 aaKnown RBP3.37□□□□□ -1.87
PTPRK-220ENST00000531466 ATP6V0A2Q9Y487 856 aa3.37□□□□□ -1.87
PTPRK-220ENST00000531466 A0A087WUV0 522 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 ANKRD18BA2A2Z9 1011 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 C2orf81A6NN90 581 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 GPC4O75487 556 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 B3GALNT1O75752 331 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 RTN3O95197 1032 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 TBX18O95935 607 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 THEGLP0DJG4 465 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 SKILP12757 684 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 KRT13P13646 458 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 ATP6V1B1P15313 513 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 STMN1P16949 149 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 LHCGRP22888 699 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 CHMP24386 653 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 PSMA4P25789 261 aaKnown RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 RAD52P43351 418 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 CLNS1AP54105 237 aaKnown RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 DCAF7P61962 342 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 PNRC1Q12796 327 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 PRPF4BQ13523 1007 aaKnown RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 CCDC152Q4G0S7 254 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 SLC10A5Q5PT55 438 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 CFAP58Q5T655 872 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 LYSMD4Q5XG99 296 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 ACSM2BQ68CK6 577 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 VITQ6UXI7 678 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 TRIML1Q8N9V2 468 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 SUMF1Q8NBK3 374 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 TBC1D16Q8TBP0 767 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 KIAA1524Q8TCG1 905 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 ARHGEF2Q92974 986 aaKnown RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 PERPQ96FX8 193 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 C1orf147Q96MC9 270 aaPredicted RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 NECTIN4Q96NY8 510 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 NCAPGQ9BPX3 1015 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 S1PR5Q9H228 398 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 TRPV5Q9NQA5 729 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 RRP7BPQ9NSQ0 103 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 BLOC1S6Q9UL45 172 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 AGTPBP1Q9UPW5 1226 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 TRAF3IP3Q9Y228 551 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 DDX49Q9Y6V7 483 aaKnown RBP3.36□□□□□ -1.87
PTPRK-220ENST00000531466 AKNAQ7Z591 1439 aa3.36□□□□□ -1.87
PTPRK-220ENST00000531466 A8MXK9 166 aa3.35□□□□□ -1.87
PTPRK-220ENST00000531466 H0YC42 278 aa3.35□□□□□ -1.87
PTPRK-220ENST00000531466 BOLA2-SMG1P6H3BVE0 249 aa3.35□□□□□ -1.87
PTPRK-220ENST00000531466 NDUFS4O43181 175 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms