RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 H7C0C1 242 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 AKR1B10O60218 316 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 SLC19A2O60779 497 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 STK10O94804 968 aaKnown RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 BMP10O95393 424 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 CLDN14O95500 239 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 RPN2P04844 631 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SERPINA7P05543 415 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 ZGLP1P0C6A0 271 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 PRR35P0CG20 571 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 CD1EP15812 388 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 MCM3P25205 808 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 ACADLP28330 430 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SOX11P35716 441 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 GRIA3P42263 894 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 ATP5OP48047 213 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 ZNF140P52738 457 aaPredicted RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 CACNG1Q06432 222 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 KLC1Q07866 573 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 TESK1Q15569 626 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SF1Q15637 639 aaKnown RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 LONRF1Q17RB8 773 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 LCE2AQ5TA79 106 aaPredicted RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 CCDC181Q5TID7 509 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 ABHD17BQ5VST6 288 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 PRMT9Q6P2P2 845 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 FIGLAQ6QHK4 219 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 CLEC17AQ6ZS10 378 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 RIPOR1Q6ZS17 1223 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 CCDC50Q8IVM0 306 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 RHOT2Q8IXI1 618 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SIRT6Q8N6T7 355 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 STT3BQ8TCJ2 826 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 BRIX1Q8TDN6 353 aaKnown RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 C8orf44Q96CB5 159 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 HAUS1Q96CS2 278 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 MAGED4Q96JG8 741 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 GBP4Q96PP9 640 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 PPP1R2P1Q96PQ5 205 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 QKIQ96PU8 341 aaKnown RBP eCLIP8.59□□□□□ -1.03
VPS11-203ENST00000529545 RIC8BQ9NVN3 520 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 TEKT2Q9UIF3 430 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 PLAGL1Q9UM63 463 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 NENFQ9UMX5 172 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 KLHL20Q9Y2M5 609 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 MAU2Q9Y6X3 613 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 NF1P21359 2839 aa8.59□□□□□ -1.03
VPS11-203ENST00000529545 SNRNP200O75643 2136 aaKnown RBP8.59□□□□□ -1.03
VPS11-203ENST00000529545 TRBV5-4A0A0C4DH59 114 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 CCL22O00626 93 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 FANCGO15287 622 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 PRAMEF2O60811 474 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 DIAPH2O60879 1101 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ZRANB2O95218 330 aaKnown RBP eCLIP8.58□□□□□ -1.04
VPS11-203ENST00000529545 FKBP9O95302 570 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 MBD3O95983 291 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 F10P00742 488 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 OR56A5P0C7T3 313 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 TPBGLP0DKB5 382 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ICAM2P13598 275 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 MST1P26927 711 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 PEBP1P30086 187 aaKnown RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 ADRA1AP35348 466 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 CDKN1CP49918 316 aaPredicted RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 EMP2P54851 167 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 UBASH3AP57075 661 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 VSX2P58304 361 aaPredicted RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 TLE4Q04727 773 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ITIH4Q14624 930 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 TAZQ16635 292 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 DNAJC21Q5F1R6 531 aaKnown RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 WASHC2DQ5SRD0 308 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ATG9BQ674R7 924 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 RAB42Q8N4Z0 105 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 PSMF1Q92530 271 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ZUFSPQ96AP4 578 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 DNAJC1Q96KC8 554 aaKnown RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 TTC1Q99614 292 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 SPOCK3Q9BQ16 436 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 TBL1YQ9BQ87 522 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 YIPF2Q9BWQ6 316 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 RNF32Q9H0A6 362 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 MCCC2Q9HCC0 563 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 ZNHIT6Q9NWK9 470 aaKnown RBP8.58□□□□□ -1.04
VPS11-203ENST00000529545 SLC39A10Q9ULF5 831 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 CDC14AQ9UNH5 594 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 DCHS2Q6V1P9 2916 aa8.58□□□□□ -1.04
VPS11-203ENST00000529545 SLC5A10A0PJK1 596 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 FITM1A5D6W6 292 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 OR5H15A6NDH6 313 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 H7C0S8 307 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 PRPF4O43172 522 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS11-203ENST00000529545 PSTPIP1O43586 416 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 WDPCPO95876 746 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 ERVK-10P10266 1014 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 COX6A1P12074 109 aa8.57□□□□□ -1.04
VPS11-203ENST00000529545 CD9P21926 228 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms