RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 SLC1A2P43004 574 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 PIK3CGP48736 1102 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZNF140P52738 457 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 PGGT1BP53609 377 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LIMK1P53667 647 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 IRX1P78414 480 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 ECT2LQ008S8 904 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SEMG2Q02383 582 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZBTB16Q05516 673 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 GABPB1Q06547 395 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 SLC13A2Q13183 592 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CTBP1Q13363 440 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SLC12A1Q13621 1099 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 THOC5Q13769 683 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 DLG2Q15700 870 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 GEN1Q17RS7 908 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ACCSLQ4AC99 568 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LRRC73Q5JTD7 316 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TSTD2Q5T7W7 516 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TEDDM1Q5T9Z0 273 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 PDPK2PQ6A1A2 396 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZC3H14Q6PJT7 736 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 FIP1L1Q6UN15 594 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 ANGPTL8Q6UXH0 198 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 PACS1Q6VY07 963 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TMEM184AQ6ZMB5 413 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 RAPH1Q70E73 1250 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CCDC80Q76M96 950 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TAOK1Q7L7X3 1001 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 GLT6D1Q7Z4J2 308 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CCDC91Q7Z6B0 441 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TBC1D1Q86TI0 1168 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 LDB1Q86U70 411 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 TMEM135Q86UB9 458 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ADIPOR2Q86V24 386 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CAMK1DQ8IU85 385 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 DENND6AQ8IWF6 608 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ADGRG2Q8IZP9 1017 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 DCLK2Q8N568 766 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ARFGAP2Q8N6H7 521 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 STPG3Q8N7X2 389 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LSMEM1Q8N8F7 131 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 DCBLD1Q8N8Z6 715 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 DRAXINQ8NBI3 349 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 MDGA1Q8NFP4 955 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 OR13C4Q8NGS5 318 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 OR13J1Q8NGT2 312 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 LILRB1Q8NHL6 650 aaPredicted RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 GDAP1Q8TB36 358 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 STT3BQ8TCJ2 826 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 STYXQ8WUJ0 223 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ASB12Q8WXK4 309 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CDKL2Q92772 493 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 FGF14Q92915 247 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 OTUB2Q96DC9 234 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 NAF1Q96HR8 494 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 RANBP9Q96S59 729 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CPNE1Q99829 537 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SLX1AQ9BQ83 275 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 RPP25Q9BUL9 199 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 TDRD1Q9BXT4 1180 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 CAPS2Q9BXY5 557 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CIPCQ9C0C6 399 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SLC7A5P2Q9GIP4 190 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 RNF32Q9H0A6 362 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 S1PR5Q9H228 398 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZDHHC6Q9H6R6 413 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ECT2Q9H8V3 914 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 MRM3Q9HC36 420 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 ZFP14Q9HCL3 533 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ZDHHC4Q9NPG8 344 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TREX1Q9NSU2 369 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 HAUS2Q9NVX0 235 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SIDT1Q9NXL6 827 aaKnown RBP4.11□□□□□ -1.75
CD44-226ENST00000527889 GTSE1Q9NYZ3 720 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 GDE1Q9NZC3 331 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 FETUBQ9UGM5 382 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SH3BGRL2Q9UJC5 107 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 CDH7Q9ULB5 785 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 DUSP12Q9UNI6 340 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 ERVW-1Q9UQF0 538 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 TMEM98Q9Y2Y6 226 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 MTCH2Q9Y6C9 303 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 SPTBN2O15020 2390 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 GVINP1Q7Z2Y8 2422 aa4.11□□□□□ -1.75
CD44-226ENST00000527889 A0A0G2JNJ9 132 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 MAGEB16A2A368 324 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 CCDC162PA2VCL2 907 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 FAM47DPA6NHR8 397 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 PRSS29PA6NIE9 313 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 A8MX80 341 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 H3BQ06 376 aaPredicted RBP4.1□□□□□ -1.75
CD44-226ENST00000527889 M0QX08 132 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 PRPF4O43172 522 aaKnown RBP eCLIP4.1□□□□□ -1.75
CD44-226ENST00000527889 HOXC11O43248 304 aaPredicted RBP4.1□□□□□ -1.75
CD44-226ENST00000527889 KLHL41O60662 606 aa4.1□□□□□ -1.75
CD44-226ENST00000527889 SHOX2O60902 331 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms