RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 WDR36Q8NI36 951 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 SPATA33Q96N06 139 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 CYP2S1Q96SQ9 504 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 NXF2Q9GZY0 626 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 PPIL3Q9H2H8 161 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 RETREG1Q9H6L5 497 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 IL1RAPQ9NPH3 570 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 ZNF638Q14966 1978 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 TSPAN1O60635 241 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 KERAO60938 352 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 COL6A1P12109 1028 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 NPR3P17342 541 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 C10orf62Q5T681 223 aaPredicted RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 PIK3R6Q5UE93 754 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 TRIQKQ629K1 86 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 KDM4DQ6B0I6 523 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 RANBP10Q6VN20 620 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 Q6ZSR9 355 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 KRTCAP2Q8N6L1 136 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 GGHQ92820 318 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 MGLLQ99685 303 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 C1QTNF7Q9BXJ2 289 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 TFB2MQ9H5Q4 396 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 EVA1BQ9NVM1 165 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 MCUBQ9NWR8 336 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 THUMPD1Q9NXG2 353 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 LY75O60449 1722 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 FAM240BA0A1B0GVZ2 78 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 SLC7A4O43246 635 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 FABP3P05413 133 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 CDK1P06493 297 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 MSL3P1P0C860 447 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 CCNCP24863 283 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 DBPQ10586 325 aaPredicted RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 NFE2L1Q14494 772 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 CREB3L2Q70SY1 520 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 GPR149Q86SP6 731 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 ZNF598Q86UK7 904 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 RASAL3Q86YV0 1011 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 CCDC71Q8IV32 467 aaPredicted RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 B3GALNT2Q8NCR0 500 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 OR4M1Q8NGD0 313 aa12.18□□□□□ -0.46
TSKU-203ENST00000527881 SAMD4AQ9UPU9 718 aaKnown RBP12.18□□□□□ -0.46
TSKU-203ENST00000527881 STRCQ7RTU9 1775 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 CLCA1A8K7I4 914 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SEC22BO75396 215 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 RETP07949 1114 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 NAGAP17050 411 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 CSNK2BP67870 215 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SNTA1Q13424 505 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 POU4F3Q15319 338 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 XKR7Q5GH72 579 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 METTL7BQ6UX53 244 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 GPSM1Q86YR5 675 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ZNF419Q96HQ0 510 aaPredicted RBP12.17□□□□□ -0.46
TSKU-203ENST00000527881 C8orf48Q96LL4 319 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 KLHL5Q96PQ7 755 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 OR5M11Q96RB7 305 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SPATA9Q9BWV2 254 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 DUSP16Q9BY84 665 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SLC39A8Q9C0K1 460 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 MAGIXQ9H6Y5 334 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 TAS2R13Q9NYV9 303 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 PSORS1C1Q9UIG5 152 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 STOML2Q9UJZ1 356 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 IGKV6D-21A0A0A0MT36 114 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ARNTLO00327 626 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 MRPS14O60783 128 aaKnown RBP12.17□□□□□ -0.46
TSKU-203ENST00000527881 PGRP06401 933 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 PRR35P0CG20 571 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 PRSS56P0CW18 603 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 NRIP1P48552 1158 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 HSPA14Q0VDF9 509 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 GPR19Q15760 415 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 XKRXQ6PP77 449 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 NIM1KQ8IY84 436 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 NTAN1Q96AB6 310 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ZNF214Q9UL59 606 aaPredicted RBP12.17□□□□□ -0.46
TSKU-203ENST00000527881 ALG5Q9Y673 324 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
TSKU-203ENST00000527881 TP53P04637 393 aaPredicted RBP12.17□□□□□ -0.46
TSKU-203ENST00000527881 FDXRP22570 491 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 BRCC3P46736 316 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 RORCP51449 518 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 HMGCS1Q01581 520 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 MAB21L1Q13394 359 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 VEPH1Q14D04 833 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SNX20Q7Z614 316 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 DNAJC22Q8N4W6 341 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 AKAP1Q92667 903 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■□ 20.7
TSKU-203ENST00000527881 KIAA1191Q96A73 305 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ELOVL6Q9H5J4 265 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 GOLGA2P5Q9HBQ8 144 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 SLC25A37Q9NYZ2 338 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ATP6V1HQ9UI12 483 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ZNF112Q9UJU3 913 aa12.17□□□□□ -0.46
TSKU-203ENST00000527881 ZNF225Q9UK10 706 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms