RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 IL1RAPL1Q9NZN1 696 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 ZC3H7BQ9UGR2 993 aaKnown RBP21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 RUVBL2Q9Y230 463 aaKnown RBP21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 DRG1Q9Y295 367 aaKnown RBP21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 MAU2Q9Y6X3 613 aa21.44■■□□□ 1.02
TRAPPC4-208ENST00000527680 A0A0J9YVX5 310 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 PFDN6O15212 129 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 VAPBO95292 243 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 FKBP9O95302 570 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 CBX6O95503 412 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 EIF2S1P05198 315 aaKnown RBP21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 ITGAXP20702 1163 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 FMO4P31512 558 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 CCNFP41002 786 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 RBBP7Q16576 425 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 CCSMST1Q4G0I0 132 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 MEI1Q5TIA1 1274 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 CES3Q6UWW8 571 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 EIF2B3Q9NR50 452 aaKnown RBP21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 TREX1Q9NSU2 369 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 NXT1Q9UKK6 140 aaKnown RBP21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 FAM169AQ9Y6X4 670 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 PCM1Q15154 2024 aa21.43■■□□□ 1.02
TRAPPC4-208ENST00000527680 HYKKA2RU49 373 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 ANKUB1A6NFN9 424 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 PRICKLE3O43900 615 aaPredicted RBP21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 CTSVO60911 334 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 RPS3P23396 243 aaKnown RBP eCLIP21.42■■□□□ 1.022e-8■■■■■ 45.7
TRAPPC4-208ENST00000527680 MGAT1P26572 445 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 PSMB5P28074 263 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 CDC25BP30305 580 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 GCGRP47871 477 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 TERF1P54274 439 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 HIF1AQ16665 826 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 AGAP7PQ5VUJ5 663 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 MRNIPQ6NTE8 343 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 Q6ZS92 163 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 FAM136AQ96C01 138 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 AGAP4Q96P64 663 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 MRM3Q9HC36 420 aaKnown RBP21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 ZNF304Q9HCX3 659 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 AGPAT4Q9NRZ5 378 aa21.42■■□□□ 1.02
TRAPPC4-208ENST00000527680 CNTRLQ7Z7A1 2325 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 DOCK10Q96BY6 2186 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 KRT87PA6NCN2 255 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 GOLGA8KD6RF30 607 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 GOLGA8TH3BQL2 631 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 SOCS6O14544 535 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 ONECUT2O95948 504 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 RNF224P0DH78 156 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 CHRM3P20309 590 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 KCNJ1P48048 391 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 OCA2Q04671 838 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 KIRREL2Q6UWL6 708 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 CUZD1Q86UP6 607 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 OR2L3Q8NG85 312 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 DNAJB14Q8TBM8 379 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 MAIP1Q8WWC4 291 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 MFSD3Q96ES6 412 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 SPSB2Q99619 263 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 SLC26A1Q9H2B4 701 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 SEMA3GQ9NS98 782 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 CTSFQ9UBX1 484 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 HS3ST3B1Q9Y662 390 aa21.41■■□□□ 1.02
TRAPPC4-208ENST00000527680 HIVEP3Q5T1R4 2406 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 ERVK-10P10266 1014 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 TSTA3Q13630 321 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 SIX1Q15475 284 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 TUBB8Q3ZCM7 444 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 FRMPD2BQ6IN97 320 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 DRICH1Q6PGQ1 229 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 COX15Q7KZN9 410 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 PRSS58Q8IYP2 241 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 INPP5DQ92835 1189 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 CNDP1Q96KN2 507 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 WDR77Q9BQA1 342 aaPredicted RBP21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 ACAT2Q9BWD1 397 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 YIPF2Q9BWQ6 316 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 LZTFL1Q9NQ48 299 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 SYBUQ9NX95 663 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 CRYL1Q9Y2S2 319 aa21.4■■□□□ 1.02
TRAPPC4-208ENST00000527680 LOC105369274A0A096LPK9 316 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 LOC102723532A0A0G2JNH3 316 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 FITM1A5D6W6 292 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 FGGP02679 453 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 CMPK1P30085 196 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 CTSL3PQ5NE16 218 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 LRRC8BQ6P9F7 803 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 OR4N4Q8N0Y3 316 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 DTWD1Q8N5C7 304 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 OR2A1Q8NGT9 310 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 HMGCLL1Q8TB92 370 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 MIEF2Q96C03 454 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 THOC3Q96J01 351 aaKnown RBP21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 C5orf34Q96MH7 638 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 ZNF285Q96NJ3 590 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 CRB3Q9BUF7 120 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 KIFC1Q9BW19 673 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 LHPPQ9H008 270 aa21.39■■□□□ 1.01
TRAPPC4-208ENST00000527680 STOX2Q9P2F5 926 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms