RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ADGRE3Q9BY15 652 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 NACA2Q9H009 215 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PARVBQ9HBI1 364 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 FBXO8Q9NRD0 319 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 VNN3Q9NY84 501 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 GOLGA8CPA6NN73 597 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 A8MU76 341 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ANKRD66B4E2M5 251 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 hCG_2039718K7EN88 272 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TLR5O60602 858 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 FKBP9O95302 570 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 DLGAP3O95886 979 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 HOXD9P28356 352 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 SYT16Q17RD7 645 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CARD16Q5EG05 197 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CATSPEREQ5SY80 951 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ARMC8Q8IUR7 673 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TMEM132CQ8N3T6 1108 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 YIPF6Q96EC8 236 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CIPCQ9C0C6 399 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 MAGIXQ9H6Y5 334 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PDFQ9HBH1 243 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 OLA1Q9NTK5 396 aaKnown RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PDP1Q9P0J1 537 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ANKMY1Q9P2S6 941 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 POU2F3Q9UKI9 436 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 DHRS7Q9Y394 339 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 PCDHGB1Q9Y5G3 927 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 EFCAB9A8MZ26 197 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CD6P30203 668 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 GRK3P35626 688 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 MASP1P48740 699 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CLK3P49761 638 aaKnown RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CLCN4P51793 760 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CLCN7P51798 805 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 RPS24P62847 133 aaKnown RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 SLC35A2P78381 396 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CPZQ66K79 652 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ATG9BQ674R7 924 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 SUSD1Q6UWL2 747 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 AHSA2Q719I0 299 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CEP68Q76N32 757 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 C10orf111Q8N326 155 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 POC5Q8NA72 575 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 STARD8Q92502 1023 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 UBE2FQ969M7 185 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 C8orf48Q96LL4 319 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 TSSK3Q96PN8 268 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 BCL7BQ9BQE9 202 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 GPR63Q9BZJ6 419 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 C6orf62Q9GZU0 229 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 CLPBQ9H078 707 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 MAGEH1Q9H213 219 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 DSN1Q9H410 356 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 SCHIP1Q9P0W5 487 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.19□□□□□ -0.467e-22■■■■■ 89.9
CAPN1-208ENST00000527323 AP3M1Q9Y2T2 418 aa12.19□□□□□ -0.46
CAPN1-208ENST00000527323 ZFP37Q9Y6Q3 630 aaPredicted RBP12.19□□□□□ -0.46
CAPN1-208ENST00000527323 M0QX08 132 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 LCKP06239 509 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 GSSP48637 474 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 RGS4P49798 205 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 DAPP51397 102 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 PPP5CP53041 499 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ZC3H12BQ5HYM0 836 aaKnown RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 SYT6Q5T7P8 510 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 SHQ1Q6PI26 577 aaKnown RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 SBSNQ6UWP8 590 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 HORMAD1Q86X24 394 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 REXO5Q96IC2 774 aaKnown RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 UROC1Q96N76 676 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF300Q96RE9 604 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 INPP5KQ9BT40 448 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 FAM126AQ9BYI3 521 aaPredicted RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ABCG8Q9H221 673 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 DUSP21Q9H596 190 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 RMND5AQ9H871 391 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 PRM3Q9NNZ6 103 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 PLSCR2Q9NRY7 297 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 PRKAG2Q9UGJ0 569 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ABCG2Q9UNQ0 655 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 LOC730098B7Z3J9 87 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 TBX1O43435 398 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 LRATO95237 230 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 TIMP1P01033 207 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ITGAMP11215 1152 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 BCKDHAP12694 445 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 COLEC12Q5KU26 742 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 OR2T5Q6IEZ7 315 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 DOK6Q6PKX4 331 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 LINC00299Q6ZSB3 139 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 GALNT10Q86SR1 603 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 OR2T29Q8NH02 315 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 RHOXF1Q8NHV9 184 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 PHF10Q8WUB8 498 aaKnown RBP12.18□□□□□ -0.46
CAPN1-208ENST00000527323 ZNF566Q969W8 418 aa12.18□□□□□ -0.46
CAPN1-208ENST00000527323 CLMPQ9H6B4 373 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms