RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 JUPP14923 745 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 ACPPP15309 386 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 TIMP2P16035 220 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 HALP42357 657 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 EPHA5P54756 1037 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 ERVFC1P60507 584 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 RAB39AQ14964 217 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 LY6G5CQ5SRR4 150 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 HENMT1Q5T8I9 393 aaKnown RBP17.07■□□□□ 0.32
USH1C-205ENST00000527020 OR4F3Q6IEY1 312 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 KCTD8Q6ZWB6 473 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 KIAA0907Q7Z7F0 614 aaPredicted RBP17.07■□□□□ 0.32
USH1C-205ENST00000527020 GPR180Q86V85 440 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 CHPFQ8IZ52 775 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 DDHD1Q8NEL9 900 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 GFM2Q969S9 779 aaKnown RBP17.07■□□□□ 0.32
USH1C-205ENST00000527020 NCLNQ969V3 563 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 C12orf43Q96C57 262 aaKnown RBP17.07■□□□□ 0.32
USH1C-205ENST00000527020 HEPHQ9BQS7 1158 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 EBPLQ9BY08 206 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 AMBRA1Q9C0C7 1298 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 MTG2Q9H4K7 406 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 RMND5AQ9H871 391 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 USE1Q9NZ43 259 aa17.07■□□□□ 0.32
USH1C-205ENST00000527020 OR2AG2A6NM03 316 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ARHGEF33A8MVX0 844 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ZNF701M0R085 212 aaPredicted RBP17.06■□□□□ 0.32
USH1C-205ENST00000527020 WNT9AO14904 365 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 PER2O15055 1255 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 KPNA5O15131 536 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 NOBOXO60393 691 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 CYP2A6P11509 494 aaPredicted RBP17.06■□□□□ 0.32
USH1C-205ENST00000527020 MAPK1P28482 360 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 HTRA3P83110 453 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 PPP1R8Q12972 351 aaKnown RBP17.06■□□□□ 0.32
USH1C-205ENST00000527020 MTAPQ13126 283 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 LRRC26Q2I0M4 334 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ARSIQ5FYB1 569 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 OTOP2Q7RTS6 562 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FOXJ1Q92949 421 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 REXO5Q96IC2 774 aaKnown RBP17.06■□□□□ 0.32
USH1C-205ENST00000527020 RDH12Q96NR8 316 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 RIOK2Q9BVS4 552 aaKnown RBP17.06■□□□□ 0.32
USH1C-205ENST00000527020 MAGIXQ9H6Y5 334 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 POLR1BQ9H9Y6 1135 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 CXorf21Q9HAI6 301 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 TDP1Q9NUW8 608 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 HCFC2Q9Y5Z7 792 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 LRRK1Q38SD2 2015 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 TSPAN11A1L157 253 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 AP2A2O94973 939 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 GSTM1P09488 218 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 IL1RNP18510 177 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 PIGAP37287 484 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 GSTM4Q03013 218 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ABHD18Q0P651 414 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 DMC1Q14565 340 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ELMSAN1Q6PJG2 1045 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FKBP9P1Q75LS8 142 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FAM9CQ8IZT9 166 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 SVOPLQ8N434 492 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 WDR20Q8TBZ3 569 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ASZ1Q8WWH4 475 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 GAB3Q8WWW8 586 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 DTNBP1Q96EV8 351 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FAM83CQ9BQN1 747 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FAM118AQ9NWS6 357 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 SAGE1Q9NXZ1 904 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 FAM8A1Q9UBU6 413 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 ERVK-11Q9UQG0 969 aa17.06■□□□□ 0.32
USH1C-205ENST00000527020 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 CFAP99D6REC4 459 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 EFCAB14O75071 495 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 RECQLP46063 649 aaPredicted RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 HNRNPFP52597 415 aaKnown RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 WNT3P56703 355 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 ZNF77Q15935 545 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 UGT8Q16880 541 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 CCSMST1Q4G0I0 132 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 CES5AQ6NT32 575 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 ZCCHC7Q8N3Z6 543 aaKnown RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 TRAM1L1Q8N609 369 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 LILRA3Q8N6C8 439 aaPredicted RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 NAT16Q8N8M0 369 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 OR7A2PQ8NGA2 310 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 OR10Q1Q8NGQ4 319 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 DOK1Q99704 481 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 THG1LQ9NWX6 298 aaKnown RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 NFKBIL1Q9UBC1 381 aaPredicted RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 PABPN1LA6NDY0 278 aaKnown RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 RFXANKO14593 260 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 SCN2BO60939 215 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
USH1C-205ENST00000527020 CPNE6O95741 557 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 DCKP27707 260 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 DCTP40126 519 aa17.05■□□□□ 0.32
USH1C-205ENST00000527020 CTSCP53634 463 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms