RNA–Protein interactions for RNA: ENST00000525936.1

EXOSC4-202, Transcript of exosome component 4, humanhuman

TSL 3 BASIC

Gene EXOSC4, Length 606 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-202ENST00000525936 BROXQ5VW32 411 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 FIGLAQ6QHK4 219 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 CACNA2D3Q8IZS8 1091 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 NKAPQ8N5F7 415 aaKnown RBP19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 SLC38A9Q8NBW4 561 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 CRELD1Q96HD1 420 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 ACSS3Q9H6R3 686 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 NFU1Q9UMS0 254 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 NOVA2Q9UNW9 492 aaKnown RBP19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 KLHL20Q9Y2M5 609 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 PCDHB3Q9Y5E6 796 aa19.02■□□□□ 0.64
EXOSC4-202ENST00000525936 IGSF10Q6WRI0 2623 aa19.02■□□□□ 0.63
EXOSC4-202ENST00000525936 PCM1Q15154 2024 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 TMEM150CB9EJG8 249 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 RHOXF2BP0C7M4 288 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 TMPRSS3P57727 454 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 PRDX1Q06830 199 aaKnown RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 ABHD18Q0P651 414 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 SRSF6Q13247 344 aaKnown RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 EFTUD2Q15029 972 aaKnown RBP eCLIP19.01■□□□□ 0.632e-7■■■■■ 39.1
EXOSC4-202ENST00000525936 PPP1R3AQ16821 1122 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 SUSD1Q6UWL2 747 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 SBSNQ6UWP8 590 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 C6orf15Q6UXA7 325 aaPredicted RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 ZNF517Q6ZMY9 492 aaPredicted RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 ESX1Q8N693 406 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 UBXN10Q96LJ8 280 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 LRFN5Q96NI6 719 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 CYTH2Q99418 400 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 MIPEPQ99797 713 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 RHOXF2Q9BQY4 288 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 CAB39LQ9H9S4 337 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 FANCEQ9HB96 536 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 INTS7Q9NVH2 962 aaKnown RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 STOX2Q9P2F5 926 aaPredicted RBP19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 SERTAD3Q9UJW9 196 aa19.01■□□□□ 0.63
EXOSC4-202ENST00000525936 IGKV1-8A0A0C4DH67 115 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 HMX2A2RU54 273 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 K7ENP7 123 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 TERTO14746 1132 aaKnown RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 SCRG1O75711 98 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 KRT37O76014 449 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 SYF2O95926 243 aaKnown RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 ENO2P09104 434 aaPredicted RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 WT1P19544 449 aaPredicted RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 PHBP35232 272 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 STAT5AP42229 794 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 CSRP3P50461 194 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 ATP1A2P50993 1020 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 AP1S2P56377 157 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 USP10Q14694 798 aaKnown RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 MANEAQ5SRI9 462 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 INO80CQ6PI98 192 aaPredicted RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 VASH2Q86V25 355 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 SYTL1Q8IYJ3 562 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 EIF1ADQ8N9N8 165 aaKnown RBP19■□□□□ 0.63
EXOSC4-202ENST00000525936 GALNT6Q8NCL4 622 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 PPFIBP2Q8ND30 876 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 TSPAN17Q96FV3 270 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 ZNF285Q96NJ3 590 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 CPNE5Q9HCH3 593 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 GPAMQ9HCL2 828 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 PLCL2Q9UPR0 1127 aa19■□□□□ 0.63
EXOSC4-202ENST00000525936 LOC101059948A0A1B0GTJ6 334 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 OR2A25A4D2G3 310 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 CDC7O00311 574 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 CTSVO60911 334 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 MT-ND3P03897 115 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 NTRK1P04629 796 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 CTSBP07858 339 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 STMN1P16949 149 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 ITGA1P56199 1179 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 VAC14Q08AM6 782 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 SLMAPQ14BN4 828 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 PRAMEF17Q5VTA0 474 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 ICE2Q659A1 982 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 AGTRAPQ6RW13 159 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 MBOAT1Q6ZNC8 495 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 MCATQ8IVS2 390 aaKnown RBP18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 IL22RA1Q8N6P7 574 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 ACAT2Q9BWD1 397 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 TXLNGYQ9BZA5 131 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 DERL2Q9GZP9 239 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 AKIRIN1Q9H9L7 192 aaPredicted RBP18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 SLC6A20Q9NP91 592 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 EURLQ9NYK6 297 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 PADI1Q9ULC6 663 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 ATMQ13315 3056 aa18.99■□□□□ 0.63
EXOSC4-202ENST00000525936 SEC16AO15027 2179 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 ESPNB1AK53 854 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 CPNE3O75131 537 aaKnown RBP18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 ACSL3O95573 720 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 HIST1H2AGP0C0S8 130 aaPredicted RBP18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 LIFP15018 202 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 HIST1H2ADP20671 130 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 CMPK1P30085 196 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 RPA3P35244 121 aaPredicted RBP18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 RORAP35398 523 aa18.98■□□□□ 0.63
EXOSC4-202ENST00000525936 GCGRP47871 477 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms