RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MT-CYBP00156 380 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 LDLRP01130 860 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 TRBC1P01850 177 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 F13BP05160 661 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CLTAP09496 248 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 DANCRP0C864 163 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ZNF888P0CJ79 500 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 FCGR2AP12318 317 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SRMP19623 302 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 MSR1P21757 451 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 GLDCP23378 1020 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 UCP1P25874 307 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 HLA-FP30511 346 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 FCGR2BP31994 310 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 GRIA1P42261 906 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 NPBWR1P48145 328 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 RGS4P49798 205 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 GSCP56915 257 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 B2MP61769 119 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 POLR2LP62875 67 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 MRPS34P82930 218 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 CBX1P83916 185 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 MC2RQ01718 297 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ROR2Q01974 943 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 CNTN2Q02246 1040 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CSTF1Q05048 431 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 CACNG1Q06432 222 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 DNASE1L3Q13609 305 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 TUBA3CQ13748 450 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ENPP2Q13822 863 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CYLC2Q14093 348 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 MAPK6Q16659 721 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SOWAHAQ2M3V2 549 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 KIF19Q2TAC6 998 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 HSP90AA4PQ58FG1 418 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 AKNAD1Q5T1N1 836 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PRAMEF5Q5TYX0 476 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PRAMEF6Q5VXH4 476 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SEL1L3Q68CR1 1132 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CLEC6AQ6EIG7 209 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 TTC23LQ6PF05 361 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 FBXO46Q6PJ61 603 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 SLC39A5Q6ZMH5 540 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SCARA5Q6ZMJ2 495 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ASPGQ86U10 573 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 TMEM126BQ8IUX1 230 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 IZUMO1Q8IYV9 350 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 DSELQ8IZU8 1212 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SCAIQ8N9R8 606 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 NSUN7Q8NE18 718 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 SPATA4Q8NEY3 305 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 NETO1Q8TDF5 533 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 WIPF2Q8TF74 440 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PIGBQ92521 554 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 MSI2Q96DH6 328 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 ZNF479Q96JC4 524 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 APOLD1Q96LR9 279 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 SPATA33Q96N06 139 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 OLFM1Q99784 485 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 KCNS3Q9BQ31 491 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CADM1Q9BY67 442 aaKnown RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 TKTL2Q9H0I9 626 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 MAGT1Q9H0U3 335 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 BLZF1Q9H2G9 400 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 RGCCQ9H4X1 137 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PCDH9Q9HC56 1237 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ZFP14Q9HCL3 533 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 TMEM248Q9NWD8 314 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 ONECUT1Q9UBC0 465 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 NLKQ9UBE8 527 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PACSIN2Q9UNF0 486 aaPredicted RBP4.33□□□□□ -1.72
CD44-213ENST00000525209 KCNJ14Q9UNX9 436 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 PKP3Q9Y446 797 aa4.33□□□□□ -1.72
CD44-213ENST00000525209 CFAP74Q9C0B2 1584 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 EFCAB5A4FU69 1503 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ARAP3Q8WWN8 1544 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ABCC4O15439 1325 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 PITPNM2Q9BZ72 1349 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 C1orf226A1L170 272 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ASB14A6NK59 587 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 DUXAA6NLW8 204 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 OR2AG2A6NM03 316 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 LRRIQ3A6PVS8 624 aaPredicted RBP4.32□□□□□ -1.72
CD44-213ENST00000525209 NOTOA8MTQ0 251 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 H0YHG0 523 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 SLC28A1O00337 649 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 DSCR3O14972 297 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 HDAC3O15379 428 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 FCMRO60667 390 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 ATP6V1G1O75348 118 aa4.32□□□□□ -1.72
CD44-213ENST00000525209 CDK14O94921 469 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms