RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 MAU2Q9Y6X3 613 aa11.32□□□□□ -0.6
CLNS1A-202ENST00000525064 SVILO95425 2214 aa11.32□□□□□ -0.6
CLNS1A-202ENST00000525064 CPAMD8Q8IZJ3 1885 aa11.32□□□□□ -0.6
CLNS1A-202ENST00000525064 SCN3AQ9NY46 2000 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 LOC105369274A0A096LPK9 316 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 LOC102723532A0A0G2JNH3 316 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 ARHGEF33A8MVX0 844 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 PEX12O00623 359 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 AGFG2O95081 481 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 ONECUT2O95948 504 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 VSX2P58304 361 aaPredicted RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 CCZ1BP86790 482 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 CCZ1P86791 482 aaPredicted RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 KCNJ11Q14654 390 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 NKG7Q16617 165 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 EIF2S3LQ2VIR3 472 aaKnown RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 ACSBG2Q5FVE4 666 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 FHL5Q5TD97 284 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 TTC27Q6P3X3 843 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 ZNF662Q6ZS27 426 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 CENPUQ71F23 418 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 OVCH1Q7RTY7 1134 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 LRRC6Q86X45 466 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 OR4N4Q8N0Y3 316 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 CLEC1AQ8NC01 280 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 OR2L3Q8NG85 312 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 OR2A1Q8NGT9 310 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 FKBP10Q96AY3 582 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 RAD51AP1Q96B01 352 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 SNRNP40Q96DI7 357 aaKnown RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 IP6K3Q96PC2 410 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 SLC30A3Q99726 388 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 SELENOSQ9BQE4 189 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 RAB11FIP5Q9BXF6 653 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 INTS7Q9NVH2 962 aaKnown RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 C5AR2Q9P296 337 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 FBXL4Q9UKA2 621 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 G3BP2Q9UN86 482 aaKnown RBP11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 NTNG1Q9Y2I2 539 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 ZKSCAN5Q9Y2L8 839 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 CRYL1Q9Y2S2 319 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 HS3ST3B1Q9Y662 390 aa11.31□□□□□ -0.6
CLNS1A-202ENST00000525064 SCN2AQ99250 2005 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 A0A0J9YVX5 310 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 FITM1A5D6W6 292 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 AGPSO00116 658 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CCDC175P0C221 793 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ERGP11308 486 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 MMP11P24347 488 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ARSFP54793 590 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 GRM7Q14831 915 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CYP2A13Q16696 494 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ZC3H12BQ5HYM0 836 aaKnown RBP11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 WASHC2DQ5SRD0 308 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 KIAA0930Q6ICG6 404 aaPredicted RBP11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 SUSD1Q6UWL2 747 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 C4orf22Q6V702 233 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 RNF44Q7L0R7 432 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CUZD1Q86UP6 607 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CAND1Q86VP6 1230 aaKnown RBP11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 HPS6Q86YV9 775 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 AGGF1Q8N302 714 aaeCLIP11.3□□□□□ -0.61e-6■□□□□ 8.2
CLNS1A-202ENST00000525064 CISD2Q8N5K1 135 aaKnown RBP11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 GIMAP7Q8NHV1 300 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 GSDMBQ8TAX9 411 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 C10orf90Q96M02 699 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ACAT2Q9BWD1 397 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ENAMQ9NRM1 1142 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 ASF1BQ9NVP2 202 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 SPATA7Q9P0W8 599 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CDC23Q9UJX2 597 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CROCCQ5TZA2 2017 aa11.3□□□□□ -0.6
CLNS1A-202ENST00000525064 CACNA1DQ01668 2161 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 IGKV1-8A0A0C4DH67 115 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 OR2A25A4D2G3 310 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 TARM1B6A8C7 271 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 FFAR3O14843 346 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 GPR42O15529 346 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 MATN4O95460 622 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 ALBP02768 609 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 CD63P08962 238 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 OGNP20774 298 aaKnown RBP11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 ITGA3P26006 1051 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 MAGEA6P43360 314 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 SNRPNP63162 240 aaKnown RBP11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 Q0VFX4 171 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 GPS1Q13098 491 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 NR6A1Q15406 480 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 HIF1AQ16665 826 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 KLHL38Q2WGJ6 581 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 CRB2Q5IJ48 1285 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 TCTE1Q5JU00 501 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 MRNIPQ6NTE8 343 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 TTC23LQ6PF05 361 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 KIRREL2Q6UWL6 708 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 CILP2Q8IUL8 1156 aa11.29□□□□□ -0.6
CLNS1A-202ENST00000525064 PRSS58Q8IYP2 241 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms