RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 C8GP07360 202 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 HSD17B2P37059 387 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 ILF2Q12905 390 aaKnown RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 MAP7Q14244 749 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 COL28A1Q2UY09 1125 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 ZNF425Q6IV72 752 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 FBXO42Q6P3S6 717 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 FIGLAQ6QHK4 219 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 C19orf48Q6RUI8 117 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 SUSD1Q6UWL2 747 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 ZNF517Q6ZMY9 492 aaPredicted RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 IFT20Q8IY31 132 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 PPFIBP2Q8ND30 876 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 SMPDL3AQ92484 453 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 CDKL2Q92772 493 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 SLC22A18Q96BI1 424 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 TSPYL1Q9H0U9 437 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 SLC6A20Q9NP91 592 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 MTRF1LQ9UGC7 380 aaKnown RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 LNPEPQ9UIQ6 1025 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 RARRES3Q9UL19 164 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 NOVA2Q9UNW9 492 aaKnown RBP11.5□□□□□ -0.57
CLN8-207ENST00000524258 PCDHB11Q9Y5F2 797 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 ATMQ13315 3056 aa11.5□□□□□ -0.57
CLN8-207ENST00000524258 OR2A25A4D2G3 310 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 TARM1B6A8C7 271 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 PHGDHO43175 533 aaKnown RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 F8A1P23610 371 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SPRP35270 261 aaPredicted RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 RORAP35398 523 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 KCNC1P48547 511 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 PRDX1Q06830 199 aaKnown RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 DLG1Q12959 904 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SF1Q15637 639 aaKnown RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 TMTC4Q5T4D3 741 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 VASH2Q86V25 355 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 CTAGE3PQ8IX95 158 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 MYO1HQ8N1T3 1032 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 NKAPQ8N5F7 415 aaKnown RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 EIF1ADQ8N9N8 165 aaKnown RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 MCOLN3Q8TDD5 553 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SLC44A1Q8WWI5 657 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 ZUFSPQ96AP4 578 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 CCDC138Q96M89 665 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 CYTH2Q99418 400 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 MIPEPQ99797 713 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SGPP1Q9BX95 441 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SPRTNQ9H040 489 aaPredicted RBP11.49□□□□□ -0.57
CLN8-207ENST00000524258 ANKZF1Q9H8Y5 726 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SOHLH2Q9NX45 425 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 SH2B3Q9UQQ2 575 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 PCDHB3Q9Y5E6 796 aa11.49□□□□□ -0.57
CLN8-207ENST00000524258 FAM208BQ5VWN6 2430 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 TMEM150CB9EJG8 249 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 K7ENP7 123 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ACSL3O95573 720 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 NTRK1P04629 796 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 CAPN1P07384 714 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 SLC35E2BP0CK96 405 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 SAT1P21673 171 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 MAP4P27816 1152 aaKnown RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 GCAP28676 217 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 TNFRSF8P28908 595 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 STAT5AP42229 794 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ARL4DP49703 201 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ABHD18Q0P651 414 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 GPS2Q13227 327 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 USP10Q14694 798 aaKnown RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 DEFB110Q30KQ9 67 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 LCN10Q6JVE6 187 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 INO80CQ6PI98 192 aaPredicted RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 AGTRAPQ6RW13 159 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 LRRC69Q6ZNQ3 347 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 CEP128Q6ZU80 1094 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 CMC1Q7Z7K0 106 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 PAQR7Q86WK9 346 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 MCATQ8IVS2 390 aaKnown RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 CACNA2D3Q8IZS8 1091 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 NLGN4XQ8N0W4 816 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 SPATA6LQ8N4H0 392 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 GALNT6Q8NCL4 622 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 NLGN4YQ8NFZ3 816 aaPredicted RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 OR56A3Q8NH54 315 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ISL2Q96A47 359 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 FBXL8Q96CD0 374 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 LRFN5Q96NI6 719 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 OR4K3Q96R72 315 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 CCNL2Q96S94 520 aaPredicted RBP11.48□□□□□ -0.57
CLN8-207ENST00000524258 PLCD4Q9BRC7 762 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 DHRS4Q9BTZ2 278 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ACAT2Q9BWD1 397 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 ULBP3Q9BZM4 244 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 DERL2Q9GZP9 239 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 CPNE5Q9HCH3 593 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 GPAMQ9HCL2 828 aa11.48□□□□□ -0.57
CLN8-207ENST00000524258 EURLQ9NYK6 297 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms