RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 INTS7Q9NVH2 962 aaKnown RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 PIH1D1Q9NWS0 290 aaKnown RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 UVRAGQ9P2Y5 699 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 TSR3Q9UJK0 312 aaKnown RBP11.08□□□□□ -0.64
SDCBP-211ENST00000523441 PPT2Q9UMR5 302 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 HCFC1P51610 2035 aa11.08□□□□□ -0.64
SDCBP-211ENST00000523441 LOC105369274A0A096LPK9 316 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 IGHV1-45A0A0A0MS14 117 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 LOC102723532A0A0G2JNH3 316 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 MACROD2A1Z1Q3 448 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 KRT87PA6NCN2 255 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 NKX2-6A6NCS4 301 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 OR51F1A6NGY5 319 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 LIN7AO14910 233 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 TTI1O43156 1089 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 CTSVO60911 334 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SEC24DO94855 1032 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SLCO2B1O94956 709 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 AP2A1O95782 977 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 MYBL2P10244 700 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 TPH1P17752 444 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 AGAP20933 346 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 PSMB4P28070 264 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 ACADLP28330 430 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 PKLRP30613 574 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF140P52738 457 aaPredicted RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 IST1P53990 364 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 PPP2R2AP63151 447 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 LONRF1Q17RB8 773 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SYT16Q17RD7 645 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 CEP128Q6ZU80 1094 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 BZW1Q7L1Q6 419 aaKnown RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 PIANPQ8IYJ0 282 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 OR4N4Q8N0Y3 316 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SLC35G2Q8TBE7 412 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 GPR137Q96N19 417 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SIGLEC12Q96PQ1 595 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 MIPEPQ99797 713 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 GORASP1Q9BQQ3 440 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 CHRNA10Q9GZZ6 450 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 LMBRD1Q9NUN5 540 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 RIC8BQ9NVN3 520 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SLC39A10Q9ULF5 831 aa11.07□□□□□ -0.64
SDCBP-211ENST00000523441 PRRC2AP48634 2157 aaKnown RBP11.07□□□□□ -0.64
SDCBP-211ENST00000523441 SCN2AQ99250 2005 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 ACANP16112 2415 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 AGAP14A8MT82 685 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 SPOPO43791 374 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 KDM1AO60341 852 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 ANXA9O76027 345 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 FTH1P02794 183 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 KLK2P20151 261 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 CD9P21926 228 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 RBL1P28749 1068 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 NR2C2P49116 596 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 TYRO3Q06418 890 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 HSPA14Q0VDF9 509 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 MYBPHQ13203 477 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 TFDP2Q14188 446 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 FASTKQ14296 549 aaKnown RBP11.06□□□□□ -0.64
SDCBP-211ENST00000523441 TMTC1Q8IUR5 882 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 BEST3Q8N1M1 668 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 MMABQ96EY8 250 aaPredicted RBP11.06□□□□□ -0.64
SDCBP-211ENST00000523441 QKIQ96PU8 341 aaKnown RBP eCLIP11.06□□□□□ -0.64
SDCBP-211ENST00000523441 FAM118BQ9BPY3 351 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 TBL1YQ9BQ87 522 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 ZNF559Q9BR84 538 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 HEMGNQ9BXL5 484 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 ENKD1Q9H0I2 346 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 GBA3Q9H227 469 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 COQ3Q9NZJ6 369 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 IL1RAPL1Q9NZN1 696 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
SDCBP-211ENST00000523441 INTS1Q8N201 2190 aaKnown RBP11.06□□□□□ -0.64
SDCBP-211ENST00000523441 IGLV3-16A0A075B6K0 115 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 A0A1B0GTH6 734 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 ONECUT2O95948 504 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 STATHP02808 62 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 FDXRP22570 491 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 EEF1DP29692 281 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 DNAJA1P31689 397 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 CDKN2BP42772 138 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 YBX1P67809 324 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 OC90Q02509 493 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 TSTA3Q13630 321 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 PRPSAP1Q14558 356 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 POU6F1Q14863 301 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 PCOLCEQ15113 449 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 CEBPEQ15744 281 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 BTBD16Q32M84 506 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 GPR33Q49SQ1 333 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 CCDC181Q5TID7 509 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 YOD1Q5VVQ6 348 aaPredicted RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 SPINK14Q6IE38 97 aa11.05□□□□□ -0.64
SDCBP-211ENST00000523441 RBM43Q6ZSC3 357 aaKnown RBP11.05□□□□□ -0.64
SDCBP-211ENST00000523441 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms