RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 E7ENX8 843 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 ZNF749O43361 778 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 FAM155BO75949 473 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 FURINP09958 794 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 CYP2A7P20853 494 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 RORAP35398 523 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 MAGEA4P43358 317 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 ITGA1P56199 1179 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 TAS2R39P59534 338 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 NFKB2Q00653 900 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 TAP2Q03519 686 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 PDAP1Q13442 181 aaKnown RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 DNASE1L3Q13609 305 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 ZXDCQ2QGD7 858 aaPredicted RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 FIGLAQ6QHK4 219 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 ZNF655Q8N720 491 aaPredicted RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 FBXO15Q8NCQ5 510 aaPredicted RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 GABPB2Q8TAK5 448 aaPredicted RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 MAGEC3Q8TD91 643 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 EXTL1Q92935 676 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 SLC45A3Q96JT2 553 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 UNKQ9C0B0 810 aaKnown RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 SEMA4CQ9C0C4 833 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 CHST8Q9H2A9 424 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 ACTR5Q9H9F9 607 aaPredicted RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 CAB39LQ9H9S4 337 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 FANCEQ9HB96 536 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 LRRC4CQ9HCJ2 640 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 FAM114A2Q9NRY5 505 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 STARD5Q9NSY2 213 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 PCMTD2Q9NV79 361 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 MTO1Q9Y2Z2 717 aaKnown RBP17.16■□□□□ 0.34
CLK4-211ENST00000522556 PCDHB3Q9Y5E6 796 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 CACNA1GO43497 2377 aa17.16■□□□□ 0.34
CLK4-211ENST00000522556 CCDC88CQ9P219 2028 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 OR2B3O76000 313 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 ZNF37AP17032 561 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 TCN2P20062 427 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 ECHS1P30084 290 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 FOXL2P58012 376 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 CAV1Q03135 178 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 KBTBD12Q3ZCT8 623 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 C1orf189Q5VU69 101 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 ZNF385CQ66K41 422 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 FRMPD2BQ6IN97 320 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 UGT3A1Q6NUS8 523 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 CYB5D1Q6P9G0 228 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 FAM198BQ6UWH4 519 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 C3orf62Q6ZUJ4 267 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 BPHLQ86WA6 291 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 SLC26A11Q86WA9 606 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 DSELQ8IZU8 1212 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 OR8K5Q8NH50 307 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 KIF18AQ8NI77 898 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 ANKRD49Q8WVL7 239 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 SMPDL3AQ92484 453 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 MR1Q95460 341 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 KIAA1143Q96AT1 154 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 SLC22A18Q96BI1 424 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 CHRNA10Q9GZZ6 450 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 RHOJQ9H4E5 214 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 CUEDC1Q9NWM3 386 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 EURLQ9NYK6 297 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 STOX2Q9P2F5 926 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 DHCR7Q9UBM7 475 aaKnown RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 PADI1Q9ULC6 663 aa17.15■□□□□ 0.34
CLK4-211ENST00000522556 CORO1CQ9ULV4 474 aaPredicted RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 MDC1Q14676 2089 aaKnown RBP17.15■□□□□ 0.34
CLK4-211ENST00000522556 CTAGE15A4D2H0 777 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 E7EQ34 232 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 KIF2AO00139 706 aaPredicted RBP17.14■□□□□ 0.33
CLK4-211ENST00000522556 MEN1O00255 615 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 EIF3FO00303 357 aaPredicted RBP17.14■□□□□ 0.33
CLK4-211ENST00000522556 KATNA1O75449 491 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 MED26O95402 600 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 CAPN1P07384 714 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 CTAGE8P0CG41 777 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 CDC20Q12834 499 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 LY6DQ14210 128 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 C16orf46Q6P387 395 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 ZNF517Q6ZMY9 492 aaPredicted RBP17.14■□□□□ 0.33
CLK4-211ENST00000522556 CTAGE6Q86UF2 777 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 MCATQ8IVS2 390 aaKnown RBP17.14■□□□□ 0.33
CLK4-211ENST00000522556 CTAGE4Q8IX94 777 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 SYTL1Q8IYJ3 562 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 MYO1HQ8N1T3 1032 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 RAB42Q8N4Z0 105 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 CLIP3Q96DZ5 547 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 UBL7Q96S82 380 aaPredicted RBP17.14■□□□□ 0.33
CLK4-211ENST00000522556 DPH7Q9BTV6 452 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 PHACTR1Q9C0D0 580 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 PLCL2Q9UPR0 1127 aa17.14■□□□□ 0.33
CLK4-211ENST00000522556 LOC105369274A0A096LPK9 316 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 LOC102723532A0A0G2JNH3 316 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 A0A0J9YVX5 310 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 OR2A25A4D2G3 310 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 NPEPPSL1A6NEC2 478 aa17.13■□□□□ 0.33
CLK4-211ENST00000522556 CDC7O00311 574 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms