RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PGRMC1O00264 195 aaKnown RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 DSCR3O14972 297 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 KIF5CO60282 957 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 USP1O94782 785 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 FKBP9O95302 570 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 TSTA3Q13630 321 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 UBAP2LQ14157 1087 aaKnown RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 GRM7Q14831 915 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 TCTE1Q5JU00 501 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 WASHC2DQ5SRD0 308 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 FRMPD2BQ6IN97 320 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 SUSD1Q6UWL2 747 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 PPP1R32Q7Z5V6 425 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 ATCAYQ86WG3 371 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 AGGF1Q8N302 714 aaeCLIP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 TTC29Q8NA56 475 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 OR9A1PQ8NGU1 263 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 CPT1CQ8TCG5 803 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 FER1L6-AS2Q96M78 137 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 IP6K3Q96PC2 410 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 OSBPL9Q96SU4 736 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 XAB2Q9HCS7 855 aaKnown RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 INTS10Q9NVR2 710 aaKnown RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 P4HTMQ9NXG6 502 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 STOX2Q9P2F5 926 aaPredicted RBP19.83■□□□□ 0.77
SDCBP-209ENST00000522243 PCDHGB7Q9Y5F8 929 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 MAD1L1Q9Y6D9 718 aa19.83■□□□□ 0.77
SDCBP-209ENST00000522243 LOC105369274A0A096LPK9 316 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 LOC102723532A0A0G2JNH3 316 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 MAGEB16A2A368 324 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 DPM1O60762 260 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 PHF2O75151 1096 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 EIF2S1P05198 315 aaKnown RBP19.82■□□□□ 0.76
SDCBP-209ENST00000522243 ATP5DP30049 168 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 OR1D4P47884 311 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 CD97P48960 835 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 CUL1Q13616 776 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 CYP2A13Q16696 494 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 DCAF10Q5QP82 559 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 COX15Q7KZN9 410 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 OR4N4Q8N0Y3 316 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 EFCAB3Q8N7B9 438 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 RBMXL3Q8N7X1 1067 aaKnown RBP19.82■□□□□ 0.76
SDCBP-209ENST00000522243 NAP1L3Q99457 506 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-209ENST00000522243 C20orf96Q9NUD7 363 aaPredicted RBP19.82■□□□□ 0.76
SDCBP-209ENST00000522243 ZC3H7BQ9UGR2 993 aaKnown RBP19.82■□□□□ 0.76
SDCBP-209ENST00000522243 VPS9D1Q9Y2B5 631 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 MAU2Q9Y6X3 613 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 NUP210LQ5VU65 1888 aa19.82■□□□□ 0.76
SDCBP-209ENST00000522243 PSIP1O75475 530 aaKnown RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SORBS2O94875 1100 aaKnown RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 MED26O95402 600 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 CMPK1P30085 196 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SLC1A2P43004 574 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 UQCRFS1P47985 274 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 CLCN7P51798 805 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SRSF1Q07955 248 aaKnown RBP eCLIP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 YOD1Q5VVQ6 348 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 ARMC3Q5W041 872 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 JMJD6Q6NYC1 403 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 ZNF549Q6P9A3 640 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SHISA6Q6ZSJ9 500 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 OVCH1Q7RTY7 1134 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 NAT8LQ8N9F0 302 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 PPFIBP2Q8ND30 876 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 GIMAP7Q8NHV1 300 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SIGLEC10Q96LC7 697 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 ZNF285Q96NJ3 590 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 PKP4Q99569 1192 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SMAD5Q99717 465 aaKnown RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 DPH7Q9BTV6 452 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 CCDC68Q9H2F9 335 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SLC6A20Q9NP91 592 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 ABCF3Q9NUQ8 709 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 TRMT1Q9NXH9 659 aaKnown RBP19.81■□□□□ 0.76
SDCBP-209ENST00000522243 MED16Q9Y2X0 877 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 FAM169AQ9Y6X4 670 aa19.81■□□□□ 0.76
SDCBP-209ENST00000522243 SRPX2O60687 465 aaPredicted RBP19.8■□□□□ 0.76
SDCBP-209ENST00000522243 ALOX12BO75342 701 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 CATP04040 527 aaKnown RBP19.8■□□□□ 0.76
SDCBP-209ENST00000522243 PIM1P11309 404 aaPredicted RBP19.8■□□□□ 0.76
SDCBP-209ENST00000522243 MAGEA3P43357 314 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 MPP1Q00013 466 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 NKG7Q16617 165 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 LONRF1Q17RB8 773 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 FAM214AQ32MH5 1076 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 PRR30Q53SZ7 412 aaPredicted RBP19.8■□□□□ 0.76
SDCBP-209ENST00000522243 GALNT16Q8N428 558 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 CLEC1AQ8NC01 280 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 ACTRT1Q8TDG2 376 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 SMPDL3AQ92484 453 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 FKBP10Q96AY3 582 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 SOX17Q9H6I2 414 aaPredicted RBP19.8■□□□□ 0.76
SDCBP-209ENST00000522243 SLAMF7Q9NQ25 335 aa19.8■□□□□ 0.76
SDCBP-209ENST00000522243 HYKKA2RU49 373 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 OR2A25A4D2G3 310 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 FITM1A5D6W6 292 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 MYO1CO00159 1063 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 VPS4BO75351 444 aa19.79■□□□□ 0.76
SDCBP-209ENST00000522243 SYF2O95926 243 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms