RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 UGDHO60701 494 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 ESRRBO95718 433 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 SYPP08247 313 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 ALOX15P16050 662 aaPredicted RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CCT8P50990 548 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CCNG1P51959 295 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 TRAF3Q13114 568 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 RBBP7Q16576 425 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 GGTA1PQ4G0N0 100 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 TRIM61Q5EBN2 209 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 PRAMEF14Q5SWL7 426 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 PRAMEF13Q5VWM6 474 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CGB2Q6NT52 195 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 LCTLQ6UWM7 567 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 GPRIN3Q6ZVF9 776 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 KANSL1Q7Z3B3 1105 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CPLX4Q7Z7G2 160 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 WDR75Q8IWA0 830 aaKnown RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 SNX31Q8N9S9 440 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 SETD7Q8WTS6 366 aaKnown RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 PATE1Q8WXA2 126 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 STON2Q8WXE9 905 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 PYCR2Q96C36 320 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 MOCOSQ96EN8 888 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 MED8Q96G25 268 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 FAR2Q96K12 515 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 IL17FQ96PD4 163 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CCT8L2Q96SF2 557 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 MIPEPQ99797 713 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 NUSAP1Q9BXS6 441 aaKnown RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 TRIM55Q9BYV6 548 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 NOL11Q9H8H0 719 aaKnown RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 IPPKQ9H8X2 491 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 MID1IP1Q9NPA3 183 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 SEMA4BQ9NPR2 832 aaPredicted RBP12.64□□□□□ -0.39
CPNE3-205ENST00000522240 OR6C2Q9NZP2 312 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 CIDEBQ9UHD4 219 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 TRPS1Q9UHF7 1281 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 SLC22A14Q9Y267 594 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 R4GN57 208 aa12.64□□□□□ -0.39
CPNE3-205ENST00000522240 ARHGEF17Q96PE2 2063 aaPredicted RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 GPR179Q6PRD1 2367 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 LILRA5A6NI73 299 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SDC3O75056 442 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 ENO1P06733 434 aaKnown RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 FGF4P08620 206 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 EBLN1P0CF75 366 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 ALPPL2P10696 532 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 TSPAN8P19075 237 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 EPORP19235 508 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 RPL14P50914 215 aaKnown RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SH3BP2P78314 561 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 HHEXQ03014 270 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 E2F2Q14209 437 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 FASTKQ14296 549 aaKnown RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 GPR18Q14330 331 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 HLA-BQ31612 363 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SH2D4BQ5SQS7 431 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SPATA21Q7Z572 469 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SYVN1Q86TM6 617 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 LINC01555Q8NAE3 123 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 PPFIBP2Q8ND30 876 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 GPR156Q8NFN8 814 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 OR52B6Q8NGF0 335 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 LCN9Q8WX39 176 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SH3KBP1Q96B97 665 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 OR4K3Q96R72 315 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 DUSP23Q9BVJ7 150 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 SLC29A3Q9BZD2 475 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 FAM107BQ9H098 131 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 INTS7Q9NVH2 962 aaKnown RBP12.63□□□□□ -0.39
CPNE3-205ENST00000522240 UCKL1Q9NWZ5 548 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 NLGN3Q9NZ94 848 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 KLHL14Q9P2G3 628 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 VTI1BQ9UEU0 232 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 ZDHHC2Q9UIJ5 367 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 DYRK1BQ9Y463 629 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 KCNE2Q9Y6J6 123 aa12.63□□□□□ -0.39
CPNE3-205ENST00000522240 TDRD6O60522 2096 aaKnown RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 PRAMEF33A0A0G2JMD5 474 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 A0A1W2PPV9 198 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 MATN2O00339 956 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 NDUFAB1O14561 156 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 HGSO14964 777 aaPredicted RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 CLGNO14967 610 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 AZIN1O14977 448 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 HDAC3O15379 428 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 SNX3O60493 162 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 CCNDBP1O95273 360 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 LMNAP02545 664 aaKnown RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 GIMD1P0DJR0 217 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 UROSP10746 265 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 GNAZP19086 355 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
CPNE3-205ENST00000522240 ERVPABLB-1P60509 514 aa12.62□□□□□ -0.39
CPNE3-205ENST00000522240 BNIP3Q12983 259 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms