RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 ZNF582Q96NG8 517 aaPredicted RBP6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 TUBA1CQ9BQE3 449 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 C1QTNF4Q9BXJ3 329 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 SLA2Q9H6Q3 261 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 LRRC4Q9HBW1 653 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 FKBP14Q9NWM8 211 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 ATPIF1Q9UII2 106 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 SATB2Q9UPW6 733 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 PLEKHG2Q9H7P9 1386 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 PLEKHH1Q9ULM0 1364 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 MAGI3Q5TCQ9 1506 aa6.3□□□□□ -1.4
NUDCD1-204ENST00000521439 URADA6NGE7 173 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 CETN3O15182 167 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ZBTB14O43829 449 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 TROVE2P10155 538 aaKnown RBP eCLIP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 EEF2P13639 858 aaKnown RBP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 IDO1P14902 403 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF23P17027 643 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 GCKP35557 465 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 FNTAP49354 379 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 MLLT10P55197 1068 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 TROAPQ12815 778 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 PSMD6Q15008 389 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 C6orf163Q5TEZ5 329 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 CORO6Q6QEF8 472 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ITPRIPQ8IWB1 547 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 CCDC83Q8IWF9 413 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF595Q8IYB9 648 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 SPC24Q8NBT2 197 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ARHGAP45Q92619 1136 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 SEMA4DQ92854 862 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 PPP1R14BQ96C90 147 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 CFAP57Q96MR6 1250 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 IL17FQ96PD4 163 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 FAM107BQ9H098 131 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 TRPV6Q9H1D0 765 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ANKZF1Q9H8Y5 726 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 ERVMER34-1Q9H9K5 563 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 FKRPQ9H9S5 495 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 EQTNQ9NQ60 294 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 PIH1D3Q9NQM4 214 aaKnown RBP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 MBNL1Q9NR56 388 aaKnown RBP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 RHCGQ9UBD6 479 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 GRID1Q9ULK0 1009 aa6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 PAIP2BQ9ULR5 123 aaKnown RBP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 MTF2Q9Y483 593 aaPredicted RBP6.29□□□□□ -1.4
NUDCD1-204ENST00000521439 NESP48681 1621 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 SHANK2Q9UPX8 1470 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 ABCC5O15440 1437 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 EDDM13A0A1B0GTR0 161 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 PLSCR5A0PG75 271 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 ASPDHA6ND91 283 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 XRCC3O43542 346 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 MED24O75448 989 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 TADA2AO75478 443 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 GCNT3O95395 438 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 GUCA1CO95843 209 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 LDLRP01130 860 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 LINGO3P0C6S8 592 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 STMN1P16949 149 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 MUTP22033 750 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 MC5RP33032 325 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 CSTF2P33240 577 aaKnown RBP eCLIP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 AHRP35869 848 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 CD86P42081 329 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 FUT6P51993 359 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 PLA2G7Q13093 441 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 CST9LP1Q5W188 147 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF324BQ6AW86 544 aaPredicted RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 FAM171BQ6P995 826 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 ZNF517Q6ZMY9 492 aaPredicted RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 RBPMS2Q6ZRY4 209 aaKnown RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 CHST3Q7LGC8 479 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 IQCHQ86VS3 1027 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 TBC1D21Q8IYX1 336 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 RNF10Q8N5U6 811 aaKnown RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 TMCO5AQ8N6Q1 288 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 XXYLT1Q8NBI6 393 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 BBOF1Q8ND07 529 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 OR6J1Q8NGC5 347 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 KIF18AQ8NI77 898 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 ZFAND2BQ8WV99 257 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 SORCS1Q8WY21 1168 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 NXNL1Q96CM4 212 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 OXNAD1Q96HP4 312 aaPredicted RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 COG3Q96JB2 828 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 LINC00615Q96LM1 132 aaPredicted RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 MTMR9Q96QG7 549 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 OLFM1Q99784 485 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 NOL11Q9H8H0 719 aaKnown RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 NPAP1Q9NZP6 1156 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 CLTCL1P53675 1640 aa6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 RNF17Q9BXT8 1623 aaKnown RBP6.28□□□□□ -1.4
NUDCD1-204ENST00000521439 FAM135AQ9P2D6 1515 aa6.27□□□□□ -1.41
NUDCD1-204ENST00000521439 A0A0B4J293 547 aa6.27□□□□□ -1.41
NUDCD1-204ENST00000521439 PRSS51A0A1B0GVH4 220 aa6.27□□□□□ -1.41
NUDCD1-204ENST00000521439 CLRN2A0PK11 232 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms