RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 GSN-AS1Q9NRJ2 163 aa3.19□□□□□ -1.9
HMGN1P28-201ENST00000521340 DNAJC11Q9NVH1 559 aa3.19□□□□□ -1.9
HMGN1P28-201ENST00000521340 RNF7Q9UBF6 113 aa3.19□□□□□ -1.9
HMGN1P28-201ENST00000521340 TMED3Q9Y3Q3 217 aa3.19□□□□□ -1.9
HMGN1P28-201ENST00000521340 IGHV4OR15-8A0A075B7B6 117 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 HNRNPCL2B2RXH8 293 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRSS46E5RG02 174 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 DDX39AO00148 427 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCL24O00175 119 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 RTCAO00442 366 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SLC22A2O15244 555 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SYNGR3O43761 229 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 OAZ2O95190 189 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PGLSO95336 258 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 IGHV4-39P01824 125 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 HMOX1P09601 288 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 C8orf89P0DMQ9 161 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 JAK1P23458 1154 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCND3P30281 292 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 HSD17B3P37058 310 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CD86P42081 329 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 VAMP7P51809 220 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 NME5P56597 212 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 DSCR9P59020 149 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 NANOS2P60321 138 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 UBXN1Q04323 297 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 EEF1A2Q05639 463 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 IQCCQ4KMZ1 466 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PARP10Q53GL7 1025 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SPOUT1Q5T280 376 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 C1orf186Q6ZWK4 172 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 GET4Q7L5D6 327 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 RABEPKQ7Z6M1 372 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 FOXP4Q8IVH2 680 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 KLHL7Q8IXQ5 586 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CIARTQ8N365 385 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 RDM1Q8NG50 284 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PROX1Q92786 737 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SLC47A1Q96FL8 570 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 HES6Q96HZ4 224 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCDC43Q96MW1 224 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 RASL10BQ96S79 203 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PKP4Q99569 1192 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCDC3Q9BQI4 270 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 PIGQQ9BRB3 760 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 GTPBP2Q9BX10 602 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 OSBPL8Q9BZF1 889 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 LAT2Q9GZY6 243 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 APOBEC3GQ9HC16 384 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 TCF7L2Q9NQB0 619 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 JRKLQ9Y4A0 524 aa3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 TRIP12Q14669 1992 aaPredicted RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SPAG9O60271 1321 aaKnown RBP3.18□□□□□ -1.9
HMGN1P28-201ENST00000521340 SPATA31D1Q6ZQQ2 1576 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRDM2Q13029 1718 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A1W2PPW3 197 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 A0A1W2PRB8 838 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 GTPBP10A4D1E9 387 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SMAD6O43541 496 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 XPNPEP2O43895 674 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 PNPP00491 289 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 PRSS2P07478 247 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 KRT19P08727 400 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 DLATP10515 647 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 IRF2P14316 349 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 HLA-DPA1P20036 260 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 MSH3P20585 1137 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 CA4P22748 312 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 IER3P46695 156 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 PEX5P50542 639 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF132P52740 706 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 MLLT10P55197 1068 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 FOLH1Q04609 750 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 LGALS3BPQ08380 585 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 NPRL3Q12980 569 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 GAGE5Q13069 117 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 GAGE6Q13070 117 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SNTA1Q13424 505 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 HLFQ16534 295 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 UGP2Q16851 508 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 CCDC92Q53HC0 331 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 LRRC73Q5JTD7 316 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ELFN2Q5R3F8 820 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 C9orf57Q5W0N0 161 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 LYSMD4Q5XG99 296 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 C11orf63Q6NUN7 778 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 CORO6Q6QEF8 472 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF771Q7L3S4 317 aaPredicted RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 BHLHA9Q7RTU4 235 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 PIGWQ7Z7B1 504 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 LONP2Q86WA8 852 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 DZIP1Q86YF9 867 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 AQP12AQ8IXF9 295 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 CLYBLQ8N0X4 340 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 FBXL14Q8N1E6 418 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 ZNF843Q8N446 348 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 RTL3Q8N8U3 475 aaKnown RBP3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 OR2T12Q8NG77 320 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 NCOA7Q8NI08 942 aa3.17□□□□□ -1.9
HMGN1P28-201ENST00000521340 SCARB1Q8WTV0 552 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms