RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PTPN9P43378 593 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CDH8P55286 799 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 YWHAEP62258 255 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 TNNC1P63316 161 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 KRT83P78385 493 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 GCNT1Q02742 428 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 GPNMBQ14956 572 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TCTN1Q2MV58 587 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ASTE1Q2TB18 679 aaPredicted RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 XKR4Q5GH76 650 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CCDC122Q5T0U0 273 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TAF3Q5VWG9 929 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TMEM270Q6UE05 265 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SLC24A5Q71RS6 500 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SRLQ86TD4 932 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SLC47A2Q86VL8 602 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 LRRC52Q8N7C0 313 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SETD9Q8NE22 299 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 URGCPQ8TCY9 931 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SLC20A1Q8WUM9 679 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SHC3Q92529 594 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 APBB2Q92870 758 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PPP1R13BQ96KQ4 1090 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 LITAFQ99732 161 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 AGPAT1Q99943 283 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 FTHL17Q9BXU8 183 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PDCL3Q9H2J4 239 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PABPC3Q9H361 631 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 SMYD3Q9H7B4 428 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CYP3A43Q9HB55 503 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 UBN1Q9NPG3 1134 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 ACP6Q9NPH0 428 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 CISHQ9NSE2 258 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 SEPT11Q9NVA2 429 aaKnown RBP3.95□□□□□ -1.78
CLK4-207ENST00000520909 SLC38A7Q9NVC3 462 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 MIOSQ9NXC5 875 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 KCND3Q9UK17 655 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 TBX21Q9UL17 535 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 PPP2R2CQ9Y2T4 447 aa3.95□□□□□ -1.78
CLK4-207ENST00000520909 A0A087X0T9 212 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 GOLGA6L9A6NEM1 432 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CASTOR2A6NHX0 329 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 PIRO00625 290 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CYB561D2O14569 222 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ZNF263O14978 683 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ZNF500O60304 480 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 HUS1O60921 280 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 RFPL2O75678 378 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 TIMP1P01033 207 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CXCL10P02778 98 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 FAM228BP0C875 321 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CYP11B1P15538 503 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CD53P19397 219 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ANXA13P27216 316 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 STX2P32856 288 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 RPL9P32969 192 aaKnown RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 TTKP33981 857 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 RFC2P35250 354 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 PIGAP37287 484 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 PNPLA4P41247 253 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ARSFP54793 590 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CDR2Q01850 454 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 BTKQ06187 659 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 GFPT1Q06210 699 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 SLC20A2Q08357 652 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 PDCLQ13371 301 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 PPIGQ13427 754 aaKnown RBP eCLIP3.94□□□□□ -1.78
CLK4-207ENST00000520909 THOC5Q13769 683 aaKnown RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 PTPN14Q15678 1187 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 SLC18A3Q16572 532 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CLLU1OSQ5K130 101 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ALKBH5Q6P6C2 394 aaKnown RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 FAM43BQ6ZT52 329 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 DNAAF5Q86Y56 855 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 GHDCQ8N2G8 530 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ZNF248Q8NDW4 579 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CADM4Q8NFZ8 388 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 TNIP3Q96KP6 325 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 C16orf45Q96MC5 204 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 ZNF560Q96MR9 790 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 SDCBP2Q9H190 292 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 SNX25Q9H3E2 840 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 LZTFL1Q9NQ48 299 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 RRAGDQ9NQL2 400 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 TMEM161AQ9NX61 479 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CACNG4Q9UBN1 327 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 CDC23Q9UJX2 597 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 NOCTQ9UK39 431 aaKnown RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 BARX2Q9UMQ3 279 aaPredicted RBP3.94□□□□□ -1.78
CLK4-207ENST00000520909 GUCA1BQ9UMX6 200 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 TFR2Q9UP52 801 aa3.94□□□□□ -1.78
CLK4-207ENST00000520909 ABHD14A-ACY1A0A1B0GW23 586 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 MACROD2A1Z1Q3 448 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 FAM90A20PA6NIJ5 464 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 KPNA7A9QM74 516 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 I3L4J1 428 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 KIF5CO60282 957 aa3.93□□□□□ -1.78
CLK4-207ENST00000520909 B3GAT3O94766 335 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms