RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ARL14Q8N4G2 192 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 EXD3Q8N9H8 876 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 DCAF4L2Q8NA75 395 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 OR6K2Q8NGY2 324 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 SNRNP27Q8WVK2 155 aaKnown RBP5.84□□□□□ -1.47
PABPC1-216ENST00000520868 TIGD1Q96MW7 591 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 TBCBQ99426 244 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 NPY6RQ99463 290 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 KLF6Q99612 283 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-216ENST00000520868 CCDC3Q9BQI4 270 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 TM6SF2Q9BZW4 377 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 TRIM4Q9C037 500 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 CHST8Q9H2A9 424 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 PDCL3Q9H2J4 239 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 ZDHHC6Q9H6R6 413 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 ARHGEF38Q9NXL2 777 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 ASIC5Q9NY37 505 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 SPASTQ9UBP0 616 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 NKX1-2Q9UD57 310 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-216ENST00000520868 APOBEC3BQ9UH17 382 aaKnown RBP5.84□□□□□ -1.47
PABPC1-216ENST00000520868 MID2Q9UJV3 735 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 ITGB1BP2Q9UKP3 347 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 ITM2BQ9Y287 266 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 CSNK1G3Q9Y6M4 447 aa5.84□□□□□ -1.47
PABPC1-216ENST00000520868 BSNQ9UPA5 3926 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 CCDC187A0A096LP49 1063 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ILVBLA1L0T0 632 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 CDRT15L2A8MXV6 281 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TCEA3O75764 348 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 RNF8O76064 485 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 F9P00740 461 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 PNMA6AP0CW24 399 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 HGFP14210 728 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TSHRP16473 764 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 SLC5A2P31639 672 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 SERPINH1P50454 418 aaKnown RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 PDX1P52945 283 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ITGA8P53708 1063 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 SNX16P57768 344 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ARF5P84085 180 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 GNA12Q03113 381 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 SLC20A2Q08357 652 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 MORC3Q14149 939 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 PTK2BQ14289 1009 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 GRM3Q14832 879 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 DAZAP2Q15038 168 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TGIF1Q15583 401 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ETFDHQ16134 617 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 C2CD6Q53TS8 623 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 LRRC73Q5JTD7 316 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 BRMS1LQ5PSV4 323 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TRIM65Q6PJ69 517 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 GBP6Q6ZN66 633 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ENOSF1Q7L5Y1 443 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 SLC47A2Q86VL8 602 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 VPS36Q86VN1 386 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 FBXO39Q8N4B4 442 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 PCDH20Q8N6Y1 951 aaKnown RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 CTHRC1Q96CG8 243 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 GRAMD1AQ96CP6 724 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 C1orf74Q96LT6 269 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 CCNL2Q96S94 520 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 LRRC61Q9BV99 259 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 ZYG11BQ9C0D3 744 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 CLPBQ9H078 707 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 EPB41L5Q9HCM4 733 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 MBNL1Q9NR56 388 aaKnown RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TUBA8Q9NY65 449 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 RRN3Q9NYV6 651 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 NCKIPSDQ9NZQ3 722 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 MGAT4CQ9UBM8 478 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 DNAJC12Q9UKB3 198 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 STAP1Q9ULZ2 295 aa5.83□□□□□ -1.48
PABPC1-216ENST00000520868 HEMK1Q9Y5R4 338 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-216ENST00000520868 TRPM6Q9BX84 2022 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 IGLV3-10A0A075B6K4 115 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 LMO7DNF2Z398 122 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 GOLGA8SH3BPF8 625 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 DSCR3O14972 297 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 SNX2O60749 519 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 TM7SF2O76062 418 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 CD160O95971 181 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 UGT2B4P06133 528 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 ITGA2BP08514 1039 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 RHCEP18577 417 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 PON1P27169 355 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 IL1R2P27930 398 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 UGT1A5P35504 534 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 CARSP49589 748 aaKnown RBP5.82□□□□□ -1.48
PABPC1-216ENST00000520868 DIO1P49895 249 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 COPB1P53618 953 aaKnown RBP5.82□□□□□ -1.48
PABPC1-216ENST00000520868 PFN3P60673 137 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 CCL7P80098 99 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 PPARDQ03181 441 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 SRSF6Q13247 344 aaKnown RBP5.82□□□□□ -1.48
PABPC1-216ENST00000520868 EXOC3L4Q17RC7 722 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 KLHL40Q2TBA0 621 aa5.82□□□□□ -1.48
PABPC1-216ENST00000520868 MYLK3Q32MK0 819 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms