RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 C1orf105O95561 183 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 GAS8O95995 478 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 ETS1P14921 441 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 RPS3P23396 243 aaKnown RBP eCLIP11.27□□□□□ -0.61
POLB-208ENST00000520008 PSMB5P28074 263 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 PPARGP37231 505 aaPredicted RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 OR1D4P47884 311 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 GLRBP48167 497 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 TTPAP49638 278 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 GBX1Q14549 363 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 SF1Q15637 639 aaKnown RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 TUBB8Q3ZCM7 444 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 CCSMST1Q4G0I0 132 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 AGAP7PQ5VUJ5 663 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 FRMPD2BQ6IN97 320 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 PPP1R21Q6ZMI0 780 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 SHISA6Q6ZSJ9 500 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 KIAA1328Q86T90 577 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 TTC29Q8NA56 475 aaPredicted RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 OR2L3Q8NG85 312 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 OR2A1Q8NGT9 310 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 CFAP61Q8NHU2 1237 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 RAD51AP1Q96B01 352 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 AGAP4Q96P64 663 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 BAG1Q99933 345 aaPredicted RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 SLX1AQ9BQ83 275 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 TRIM56Q9BRZ2 755 aaKnown RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 LHPPQ9H008 270 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 SOX17Q9H6I2 414 aaPredicted RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 CHRAC1Q9NRG0 131 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 AGPAT4Q9NRZ5 378 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 IL1RAPL1Q9NZN1 696 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.27□□□□□ -0.61
POLB-208ENST00000520008 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
POLB-208ENST00000520008 CACNA1DQ01668 2161 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 OR2A25A4D2G3 310 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 CD3EAPO15446 510 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 IFNB1P01574 187 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 ERGP11308 486 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 EDN3P14138 238 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 ARNTP27540 789 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 BDKRB1P46663 353 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 YBX1P67809 324 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 KLC1Q07866 573 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 KIF5AQ12840 1032 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 ELOAQ14241 798 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 ZNF169Q14929 603 aaPredicted RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 TMED2Q15363 201 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 SIX1Q15475 284 aaPredicted RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 FAM214AQ32MH5 1076 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 PCID2Q5JVF3 399 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 CTSL3PQ5NE16 218 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 SLC13A5Q86YT5 568 aaPredicted RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 MPP5Q8N3R9 675 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 PPHLN1Q8NEY8 458 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 DNAJB14Q8TBM8 379 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 GRHL3Q8TE85 626 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 FAR1Q8WVX9 515 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 C10orf90Q96M02 699 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 BIRC8Q96P09 236 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 PANX3Q96QZ0 392 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 DESI2Q9BSY9 194 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 SYNPO2LQ9H987 977 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 EIF2B3Q9NR50 452 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 RAB6BQ9NRW1 208 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 PLSCR2Q9NRY7 297 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 GNPTGQ9UJJ9 305 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 SLC39A10Q9ULF5 831 aa11.26□□□□□ -0.61
POLB-208ENST00000520008 RUVBL2Q9Y230 463 aaKnown RBP11.26□□□□□ -0.61
POLB-208ENST00000520008 LOC105369274A0A096LPK9 316 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 LOC102723532A0A0G2JNH3 316 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 HYKKA2RU49 373 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 E7EVH7 732 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 KPNA5O15131 536 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 KLHL18O94889 574 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 MATN4O95460 622 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 HPP00738 406 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 APRTP07741 180 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 SOX11P35716 441 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 CARSP49589 748 aaKnown RBP11.25□□□□□ -0.61
POLB-208ENST00000520008 VSX2P58304 361 aaPredicted RBP11.25□□□□□ -0.61
POLB-208ENST00000520008 MFAP5Q13361 173 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 TLR1Q15399 786 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 RBBP7Q16576 425 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 PRTGQ2VWP7 1150 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 WASHC2DQ5SRD0 308 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 ATG9BQ674R7 924 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 RPUSD3Q6P087 351 aaKnown RBP11.25□□□□□ -0.61
POLB-208ENST00000520008 PRMT9Q6P2P2 845 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 LRRC6Q86X45 466 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 OR4N4Q8N0Y3 316 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 STT3BQ8TCJ2 826 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 C1orf54Q8WWF1 131 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 PSMF1Q92530 271 aa11.25□□□□□ -0.61
POLB-208ENST00000520008 THOC3Q96J01 351 aaKnown RBP11.25□□□□□ -0.61
POLB-208ENST00000520008 MIPEPQ99797 713 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms