RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 MMP11P24347 488 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 VARSP26640 1264 aaKnown RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 PSMB5P28074 263 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 FMO4P31512 558 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 CCNFP41002 786 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 OR1D4P47884 311 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 ADARP55265 1226 aaKnown RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 YBX1P67809 324 aaKnown RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 GRM7Q14831 915 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 CYP2A13Q16696 494 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 TYSND1Q2T9J0 566 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 EIF2S3LQ2VIR3 472 aaKnown RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 FAM214AQ32MH5 1076 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 WASHC2DQ5SRD0 308 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 FRMPD2BQ6IN97 320 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 MRNIPQ6NTE8 343 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 FBXO42Q6P3S6 717 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 SDCCAG8Q86SQ7 713 aaPredicted RBP11.91□□□□□ -0.5
CSMD1-205ENST00000519623 DTWD1Q8N5C7 304 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 PRELID2Q8N945 189 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 GSDMBQ8TAX9 411 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 MAIP1Q8WWC4 291 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 TCF12Q99081 682 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 SPSB2Q99619 263 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 MIPEPQ99797 713 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 SELENOSQ9BQE4 189 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 LRRC4CQ9HCJ2 640 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 B3GNT3Q9Y2A9 372 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 MRFAP1Q9Y605 127 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 HEATR5BQ9P2D3 2071 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 NUP210LQ5VU65 1888 aa11.91□□□□□ -0.5
CSMD1-205ENST00000519623 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 LOC105369274A0A096LPK9 316 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 LOC102723532A0A0G2JNH3 316 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 VSTM2BA6NLU5 285 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 NRP2O60462 931 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 KLHL41O60662 606 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 NIPSNAP2O75323 286 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 AGFG2O95081 481 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CBX6O95503 412 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 ALPPP05187 535 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CCDC175P0C221 793 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CXCR5P32302 372 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 MAGEA6P43360 314 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 VSX2P58304 361 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 AIMP2Q13155 320 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 MRPL49Q13405 166 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 FASTKQ14296 549 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CNSTQ6PJW8 725 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 KIRREL2Q6UWL6 708 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CENPUQ71F23 418 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CAND1Q86VP6 1230 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 OR4N4Q8N0Y3 316 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CISD2Q8N5K1 135 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 OR2L3Q8NG85 312 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 SKA2Q8WVK7 121 aaPredicted RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 INPP5DQ92835 1189 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 FOPNLQ96NB1 174 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 BARD1Q99728 777 aaKnown RBP11.9□□□□□ -0.5
CSMD1-205ENST00000519623 SLC6A20Q9NP91 592 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 HOMER3Q9NSC5 361 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 ASF1BQ9NVP2 202 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 IL1RAPL1Q9NZN1 696 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 FBXL4Q9UKA2 621 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 CRYL1Q9Y2S2 319 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 HS3ST3B1Q9Y662 390 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 POLEQ07864 2286 aa11.9□□□□□ -0.5
CSMD1-205ENST00000519623 NBPF19A0A087WUL8 3843 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 A0A0J9YVX5 310 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 HYKKA2RU49 373 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 OR2A25A4D2G3 310 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 H3BMM5 538 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ALOX12BO75342 701 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 IPO13O94829 963 aaKnown RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ESR1P03372 595 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 RNF224P0DH78 156 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ERGP11308 486 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 CHRM3P20309 590 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ATP5DP30049 168 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ACSBG2Q5FVE4 666 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 RNF187Q5TA31 235 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 PRAMEF13Q5VWM6 474 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ANKRD22Q5VYY1 191 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ARMC3Q5W041 872 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 KIAA0930Q6ICG6 404 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 NEPROQ6NW34 567 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 Q6ZS92 163 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 SHISA6Q6ZSJ9 500 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 CILP2Q8IUL8 1156 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 LRRC8AQ8IWT6 810 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 IQCKQ8N0W5 287 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 ZADH2Q8N4Q0 377 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 RAB42Q8N4Z0 105 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 METTL27Q8N6F8 245 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-205ENST00000519623 OTUD6BQ8N6M0 293 aa11.89□□□□□ -0.51
CSMD1-205ENST00000519623 TTC29Q8NA56 475 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms