RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 DOK6Q6PKX4 331 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 UHRF1Q96T88 793 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 PRKAB1Q9Y478 270 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 PCYT1BQ9Y5K3 369 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 ACPPP15309 386 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 HTR1EP28566 365 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 KIR2DL1P43626 348 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 CDK3Q00526 305 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 FAM83HQ6ZRV2 1179 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 SYTL1Q8IYJ3 562 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 OR9A1PQ8NGU1 263 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 APOLD1Q96LR9 279 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 BTBD9Q96Q07 612 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 OR52E6Q96RD3 313 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 NR1H4Q96RI1 486 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 CCM2LQ9NUG4 571 aaPredicted RBP25.73■■□□□ 1.71
COL13A1-210ENST00000517713 GPRC5BQ9NZH0 403 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 SERGEFQ9UGK8 458 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 KCNE2Q9Y6J6 123 aa25.73■■□□□ 1.71
COL13A1-210ENST00000517713 A0A1W2PP55 124 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 SDC1P18827 310 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 ACADLP28330 430 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 CAPN13Q6MZZ7 669 aaPredicted RBP25.72■■□□□ 1.71
COL13A1-210ENST00000517713 EP400NLQ6ZTU2 488 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 OR8J3Q8NGG0 315 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 TSSK3Q96PN8 268 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 SGK2Q9HBY8 427 aa25.72■■□□□ 1.71
COL13A1-210ENST00000517713 DHRS12A0PJE2 317 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 TACR1P25103 407 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 MTPNP58546 118 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 MRPS35P82673 323 aaKnown RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 SELPLGQ14242 412 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 AASDHQ4L235 1098 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 NOXRED1Q6NXP6 359 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 RALGPS2Q86X27 583 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 MTERF1Q99551 399 aaKnown RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 LGR4Q9BXB1 951 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 PIF1Q9H611 641 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 VAPAQ9P0L0 249 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 VPS29Q9UBQ0 182 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 NEUROG3Q9Y4Z2 214 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 CKAP5Q14008 2032 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 MTHFD1P11586 935 aaKnown RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 TBPL1P62380 186 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 ZNF776Q68DI1 518 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 MTSS1LQ765P7 747 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 AMZ2Q86W34 360 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 CSGALNACT1Q8TDX6 532 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 EZH1Q92800 747 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 NEIL2Q969S2 332 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 FCRL1Q96LA6 429 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 ZDHHC5Q9C0B5 715 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 OR52A5Q9H2C5 316 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 SEMA6AQ9H2E6 1030 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 SPATA6Q9NWH7 488 aaPredicted RBP25.71■■□□□ 1.71
COL13A1-210ENST00000517713 USP22Q9UPT9 525 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 PCDHGA11Q9Y5H2 935 aa25.71■■□□□ 1.71
COL13A1-210ENST00000517713 DFNA5O60443 496 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 NCK1P16333 377 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 PSMA4P25789 261 aaKnown RBP25.7■■□□□ 1.7
COL13A1-210ENST00000517713 MTHFRP42898 656 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 DDX39BQ13838 428 aaKnown RBP25.7■■□□□ 1.7
COL13A1-210ENST00000517713 STARD3Q14849 445 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 AGERQ15109 404 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 LRRTM4Q86VH4 590 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 GATA6Q92908 595 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 ITM2CQ9NQX7 267 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 S100A3P33764 101 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 SOX11P35716 441 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 RPA4Q13156 261 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 FXNQ16595 210 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 UNC5DQ6UXZ4 953 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 SLCO4C1Q6ZQN7 724 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 PROSER1Q86XN7 944 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 PPWD1Q96BP3 646 aaKnown RBP25.7■■□□□ 1.7
COL13A1-210ENST00000517713 BRF2Q9HAW0 419 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 AURKCQ9UQB9 309 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 PCDHB3Q9Y5E6 796 aa25.7■■□□□ 1.7
COL13A1-210ENST00000517713 TIPRLO75663 272 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 HSD3B1P14060 373 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 NPPBP16860 134 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 IL10P22301 178 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 HSD3B2P26439 372 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 OR4D2P58180 307 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 MED21Q13503 144 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 E2F2Q14209 437 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 TBCELQ5QJ74 424 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 SPDYE1Q8NFV5 336 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-210ENST00000517713 EME1Q96AY2 570 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 TESCQ96BS2 214 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 SGPP1Q9BX95 441 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 MBNL1Q9NR56 388 aaKnown RBP25.69■■□□□ 1.7
COL13A1-210ENST00000517713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.69■■□□□ 1.7
COL13A1-210ENST00000517713 SLC23A2Q9UGH3 650 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 DYRK1BQ9Y463 629 aa25.69■■□□□ 1.7
COL13A1-210ENST00000517713 MAGEA13PA6NCF6 341 aa25.68■■□□□ 1.7
COL13A1-210ENST00000517713 PHC1P78364 1004 aa25.68■■□□□ 1.7
COL13A1-210ENST00000517713 FOLH1Q04609 750 aa25.68■■□□□ 1.7
COL13A1-210ENST00000517713 TSTA3Q13630 321 aaPredicted RBP25.68■■□□□ 1.7
COL13A1-210ENST00000517713 HMBOX1Q6NT76 420 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms