RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 H0YAE9 185 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 hCG_2039718K7EN88 272 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CDC7O00311 574 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SAP18O00422 153 aaKnown RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 FMO3P31513 532 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 GDF5P43026 501 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 BMXP51813 675 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF33AQ06730 810 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C2orf27AQ580R0 203 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 DCDC5Q6ZRR9 648 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C7orf61Q8IZ16 206 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC9A6Q92581 669 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SMOC2Q9H3U7 446 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 GSTK1Q9Y2Q3 226 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 PCNTO95613 3336 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ANKRD66B4E2M5 251 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 OR1F1O43749 312 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 MAPK12P53778 367 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 DNASE1L3Q13609 305 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SLC36A3Q495N2 470 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 NHSL2Q5HYW2 709 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 MS4A13Q5J8X5 152 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 Q6ZVU0 165 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 PTCHD4Q6ZW05 846 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADGRG5Q8IZF4 528 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ENKURQ8TC29 256 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADAMTS15Q8TE58 950 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 MYDGFQ969H8 173 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 HHIPL1Q96JK4 782 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CGREF1Q99674 301 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SUV39H2Q9H5I1 410 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CCDC177Q9NQR7 707 aaPredicted RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C1orf109Q9NX04 203 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 HSFX1Q9UBD0 423 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ADAM30Q9UKF2 790 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 Q9Y3F1 56 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 NUMA1Q14980 2115 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 A0A0D9SEW6 157 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ILVBLA1L0T0 632 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CXCR6O00574 342 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 PER2O15055 1255 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 B4GAT1O43505 415 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 KERAO60938 352 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CLDN7O95471 211 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 GPX3P22352 226 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 SMIM11AP58511 58 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 KCTD11Q693B1 232 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF544Q6NX49 715 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 MED27Q6P2C8 311 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 AGMOQ6ZNB7 445 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C2orf15Q8WU43 125 aaKnown RBP10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 CYB5D2Q8WUJ1 264 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 C3orf30Q96M34 536 aa10.59□□□□□ -0.71
PCDHGA1-202ENST00000517417 RGS10O43665 173 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 UGT2B11O75310 529 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CD1DP15813 335 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 PSMA3P25788 255 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC26A3P40879 764 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZBTB6Q15916 424 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 BLOC1S3Q6QNY0 202 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 Q6ZNX1 250 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC38A2Q96QD8 506 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 WDR6Q9NNW5 1121 aaKnown RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 PTGFRNQ9P2B2 879 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF624Q9P2J8 865 aaPredicted RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CITO14578 2027 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 GABBR2O75899 941 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 RASGRP1O95267 797 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRG2P13727 222 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 KELP23276 732 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 HOXA11P31270 313 aaPredicted RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ASMTP46597 345 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 GJA8P48165 433 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR4D2P58180 307 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 RPS14P62263 151 aaKnown RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 HSPB3Q12988 150 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 GPR17Q13304 367 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CHRNA6Q15825 494 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 C11orf88Q6PI97 169 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ATG14Q6ZNE5 492 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 LARP4Q71RC2 724 aaKnown RBP eCLIP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 RETREG3Q86VR2 466 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 IZUMO1Q8IYV9 350 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC34A3Q8N130 599 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC43A3Q8NBI5 491 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC13A3Q8WWT9 602 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 C3orf14Q9HBI5 128 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZIM2Q9NZV7 527 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 MARCH4Q9P2E8 410 aaPredicted RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CENPXA8MT69 81 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAFKO60675 156 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 VIPP01282 170 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SYN1P17600 705 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRKACGP22612 351 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SPATS1Q496A3 300 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 UBXN11Q5T124 520 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms