RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 ZNF770Q6IQ21 691 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 ERI1Q8IV48 349 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 SLC44A2Q8IWA5 706 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 GCSAMQ8N6F7 178 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 PLD5Q8N7P1 536 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 HJURPQ8NCD3 748 aaPredicted RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 HM13Q8TCT9 377 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 EXOC4Q96A65 974 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 FAF2Q96CS3 445 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 SGK494Q96LW2 274 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 GFI1Q99684 422 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 PLA2G2FQ9BZM2 168 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 CPVLQ9H3G5 476 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 LTB4R2Q9NPC1 389 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 IL1RAPQ9NPH3 570 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 NPAP1Q9NZP6 1156 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 KLRF1Q9NZS2 232 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 COPG2Q9UBF2 871 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 PA2G4Q9UQ80 394 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 R3HDM2Q9Y2K5 976 aaKnown RBP-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 TNRQ92752 1358 aa-0.59□□□□□ -2.5
RNU6-557P-201ENST00000516842 SALL1Q9NSC2 1324 aa-0.6□□□□□ -2.5
RNU6-557P-201ENST00000516842 COL7A1Q02388 2944 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TRGV8A0A0C4DH27 118 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM90A7PA6NKC0 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM90A22PA8MWA6 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM90A12PA8MX19 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM90A23PA8MXZ1 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 J3QR06 171 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 SNAP23O00161 211 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FPGTO14772 594 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 SEPT4O43236 478 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 PQBP1O60828 265 aaKnown RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 GLRA3O75311 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TACC1O75410 805 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 ACTL6BO94805 426 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 ACSL3O95573 720 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 IGHG3P01860 377 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 NDST1P52848 882 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 HMGCS2P54868 508 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 EIF5P55010 431 aaKnown RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 SRPXP78539 464 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 SLAQ13239 276 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 GALEQ14376 348 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 NAA25Q14CX7 972 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TGIF1Q15583 401 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 EXT1Q16394 746 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 HIST2H2ACQ16777 129 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 IQCCQ4KMZ1 466 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 LINC00483Q53H64 154 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 CBWD5Q5RIA9 395 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 NAA35Q5VZE5 725 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TMEM198Q66K66 360 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 SCARA5Q6ZMJ2 495 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 LEKR1Q6ZMV7 388 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TADA2BQ86TJ2 420 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 CPSF7Q8N684 471 aaKnown RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 Q8NDZ9 215 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 OR14L1PQ8NHC6 308 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM71BQ8TC56 605 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 STAG1Q8WVM7 1258 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 MUL1Q969V5 352 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 PI4K2AQ9BTU6 479 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 PABPC3Q9H361 631 aaKnown RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 PIGMQ9H3S5 423 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 MROH8Q9H579 483 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 MTHFD2LQ9H903 347 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 DDX21Q9NR30 783 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TM7SF3Q9NS93 570 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 TMLHEQ9NVH6 421 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 NLGN3Q9NZ94 848 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 PKD2L2Q9NZM6 624 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 B3GAT1Q9P2W7 334 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 CACNG4Q9UBN1 327 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 NOB1Q9ULX3 412 aaKnown RBP-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 AUP1Q9Y679 476 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 BRWD3Q6RI45 1802 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 LTBP4Q8N2S1 1624 aa-0.6□□□□□ -2.51
RNU6-557P-201ENST00000516842 ANKRD61A6NGH8 418 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 STX16O14662 325 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 FGF18O76093 207 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 PRAMEF12O95522 483 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 GALTP07902 379 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 HOXC9P31274 260 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 PRKAR2BP31323 418 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 HMGCLP35914 325 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 HSPA7P48741 367 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 RIDAP52758 137 aaKnown RBP-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 AP2B1P63010 937 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 AMPD3Q01432 767 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 PIN1Q13526 163 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 GRM3Q14832 879 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 RPS6KA1Q15418 735 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 ZNF311Q5JNZ3 666 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 FAM209BQ5JX69 171 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 LCN1P1Q5VSP4 162 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 TXNDC8Q6A555 127 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 ZNF600Q6ZNG1 722 aa-0.61□□□□□ -2.51
RNU6-557P-201ENST00000516842 Q6ZSA8 131 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms