RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 FAM174BQ3ZCQ3 159 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 THOC7Q6I9Y2 204 aaKnown RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 FAM92BQ6ZTR7 304 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 DENND1AQ8TEH3 1009 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 CHIAQ9BZP6 476 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 LRMDAQ9H2I8 198 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 CLK4Q9HAZ1 481 aaKnown RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 LRRC4CQ9HCJ2 640 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 FAM149AA5PLN7 773 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 PITPNM1O00562 1244 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 PPP1R11O60927 126 aaPredicted RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 OAZ2O95190 189 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 CYP11A1P05108 521 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 JUNP05412 331 aaKnown RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 GP1BBP13224 206 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 PRKCDQ05655 676 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 KLF1Q13351 362 aaPredicted RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 SCARB2Q14108 478 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 IFI44LQ53G44 452 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 MMABQ96EY8 250 aaPredicted RBP10.78□□□□□ -0.68
TRIM41-209ENST00000515834 CIB1Q99828 191 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 OR8D2Q9GZM6 311 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 SMURF2Q9HAU4 748 aa10.78□□□□□ -0.68
TRIM41-209ENST00000515834 ENTPD5O75356 428 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 GRK5P34947 590 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 RAB8AP61006 207 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 DNASE1L3Q13609 305 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 RBM44Q6ZP01 1051 aaKnown RBP10.77□□□□□ -0.68
TRIM41-209ENST00000515834 TTLL10Q6ZVT0 673 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 FOXRED2Q8IWF2 684 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 GSTCDQ8NEC7 633 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 BADQ92934 168 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 CCDC120Q96HB5 630 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 CHCHD6Q9BRQ6 235 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 ZSCAN5AQ9BUG6 496 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 ASPNQ9BXN1 380 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 C1orf109Q9NX04 203 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 ZNF282Q9UDV7 671 aaPredicted RBP10.77□□□□□ -0.68
TRIM41-209ENST00000515834 CFL2Q9Y281 166 aa10.77□□□□□ -0.68
TRIM41-209ENST00000515834 BLOC1S5-TXNDC5H3BN57 136 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 KLRC4O43908 158 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 COQ9O75208 318 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 LRCH4O75427 683 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 EDNRAP25101 427 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 OCLNQ16625 522 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ALG10Q5BKT4 473 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SSX6Q7RTT6 188 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 LYSMD3Q7Z3D4 306 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 HTRA1Q92743 480 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 GFM1Q96RP9 751 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ZDHHC3Q9NYG2 299 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 GPR34Q9UPC5 381 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ALOX15BO15296 676 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 MTHFD1P11586 935 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 RPS14P62263 151 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 E2F2Q14209 437 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ITPRIPL2Q3MIP1 535 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ADGRF1Q5T601 910 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PRPF38BQ5VTL8 546 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 LAPTM4BQ86VI4 370 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 C12orf76Q8N812 135 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 YIPF7Q8N8F6 280 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SPERTQ8NA61 448 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 FAM47BQ8NA70 645 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ZNF548Q8NEK5 533 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ZFP3Q96NJ6 502 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 TTYH2Q9BSA4 534 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SEZ6LQ9BYH1 1024 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 C12orf65Q9H3J6 166 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PTGES2Q9H7Z7 377 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 NUP50Q9UKX7 468 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 WASF3Q9UPY6 502 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 MYOCOSA0A1B0GUC4 107 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 A0A1B0GVT2 93 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SMAD9O15198 467 aaKnown RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 FCER2P06734 321 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 AP3S2P59780 193 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SLC10A6Q3KNW5 377 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 BICRALQ6AI39 1079 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 NXPE2Q96DL1 559 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 TGM7Q96PF1 710 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 TMEM175Q9BSA9 504 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 SPIN1Q9Y657 262 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 DEPDC5O75140 1603 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 DUXAA6NLW8 204 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ADAMDEC1O15204 470 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 CLDN7O95471 211 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ADH1BP00325 375 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PGRP06401 933 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 S100A6P06703 90 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ATP1B2P14415 290 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 NR4A1P22736 598 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 ACSL1P33121 698 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 TTKP33981 857 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 C1orf61Q13536 156 aa10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PRKD1Q15139 912 aaPredicted RBP10.77□□□□□ -0.69
TRIM41-209ENST00000515834 PLEKHG6Q3KR16 790 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms