RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 SLC16A8O95907 504 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 MCM3P25205 808 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 PTPN4P29074 926 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 CMPK1P30085 196 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 GRIA3P42263 894 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 PNLIPRP1P54315 467 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 CDKN2DP55273 166 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 RPS15P62841 145 aaKnown RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 RELAQ04206 551 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 PDAP1Q13442 181 aaKnown RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 TBR1Q16650 682 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 DEFB110Q30KQ9 67 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 LINC00303Q3SY05 128 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 TCTE1Q5JU00 501 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 HECTD2Q5U5R9 776 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 YOD1Q5VVQ6 348 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF385CQ66K41 422 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 FCRL6Q6DN72 434 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 C8orf74Q6P047 294 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 BORAQ6PGQ7 559 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 UBE2R2Q712K3 238 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 PIWIL4Q7Z3Z4 852 aaKnown RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 SYVN1Q86TM6 617 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ZC3HC1Q86WB0 502 aaKnown RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 PALM2Q8IXS6 379 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 SYTL1Q8IYJ3 562 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 MYO1HQ8N1T3 1032 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 C2orf73Q8N5S3 287 aaPredicted RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 MCOLN3Q8TDD5 553 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF480Q8WV37 535 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 EEF1AKMT1Q8WVE0 214 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 DLG3Q92796 817 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 EXTL1Q92935 676 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 MR1Q95460 341 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 MED8Q96G25 268 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ZNF285Q96NJ3 590 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 DHRS4Q9BTZ2 278 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 NLNQ9BYT8 704 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 FAM129AQ9BZQ8 928 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 SLC7A5P2Q9GIP4 190 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ADNPQ9H2P0 1102 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 TSR3Q9UJK0 312 aaKnown RBP12.28□□□□□ -0.44
CLCN3-210ENST00000515420 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 VWA7Q9Y334 891 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ANKRD12Q6UB98 2062 aa12.28□□□□□ -0.44
CLCN3-210ENST00000515420 ATRXP46100 2492 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MDC1Q14676 2089 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 OR2A25A4D2G3 310 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 KRT87PA6NCN2 255 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 E7ENX8 843 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 NKX2-8O15522 239 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 HCRTR1O43613 425 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 SRPX2O60687 465 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 URI1O94763 535 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 TSPAN12O95859 305 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 CD63P08962 238 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 AGXTP21549 392 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PSMB5P28074 263 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 RPA3P35244 121 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 GCGRP47871 477 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 ARSFP54793 590 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PLTPP55058 493 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 IL2P60568 153 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 CYP4F2P78329 520 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 ABATP80404 500 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MRPS25P82663 173 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 TAP2Q03519 686 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PRDX1Q06830 199 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 FASTKQ14296 549 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PRAMEF17Q5VTA0 474 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PAQR3Q6TCH7 311 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 FAM198BQ6UWH4 519 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 RNF44Q7L0R7 432 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MCATQ8IVS2 390 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 LRRC56Q8IYG6 542 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 GPATCH11Q8N954 259 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MNS1Q8NEH6 495 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 FBXO25Q8TCJ0 367 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 ANKRD7Q92527 254 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 CDKL2Q92772 493 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PDLIM5Q96HC4 596 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 CCDC138Q96M89 665 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MIPEPQ99797 713 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MCMBPQ9BTE3 642 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 CHST8Q9H2A9 424 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 RHOJQ9H4E5 214 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 ACTL8Q9H568 366 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 AKIRIN1Q9H9L7 192 aaPredicted RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PARVBQ9HBI1 364 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MRPS30Q9NP92 439 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 SAYSD1Q9NPB0 183 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 UTP6Q9NYH9 597 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 SLC17A6Q9P2U8 582 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 FARSAQ9Y285 508 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 PSAT1Q9Y617 370 aa12.27□□□□□ -0.45
CLCN3-210ENST00000515420 MRPS18BQ9Y676 258 aaKnown RBP12.27□□□□□ -0.45
CLCN3-210ENST00000515420 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
CLCN3-210ENST00000515420 FITM1A5D6W6 292 aa12.26□□□□□ -0.45
CLCN3-210ENST00000515420 C9J4A7 227 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms