RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 WWOXQ9NZC7 414 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 GPRC5BQ9NZH0 403 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 SEMA5BQ9P283 1151 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PDP2Q9P2J9 529 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 POMT2Q9UKY4 750 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PCDHGA1Q9Y5H4 931 aa11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 MN1Q10571 1320 aaPredicted RBP11.58□□□□□ -0.56
PDLIM5-220ENST00000514830 PIPSLA2A3N6 862 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 KRT87PA6NCN2 255 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NCF1BA6NI72 391 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NCF1CA8MVU1 366 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 C2orf74A8MZ97 194 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 K7EPI3 171 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 BTN3A3O00478 584 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 E2F3O00716 465 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 DUX1O43812 170 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 SNUPNO95149 360 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CCNDBP1O95273 360 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 C9P02748 559 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PROS1P07225 676 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NCF1P14598 390 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 HRH2P25021 359 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CD1CP29017 333 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 OAS2P29728 719 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PEBP1P30086 187 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 ALDH3A1P30838 453 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 HPDP32754 393 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 ACADVLP49748 655 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 TBPL1P62380 186 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 ABATP80404 500 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 GALNT1Q10472 559 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NAE1Q13564 534 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 NAA25Q14CX7 972 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 SLC5A12Q1EHB4 618 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PERM1Q5SV97 790 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 HHATQ5VTY9 493 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 EFL1Q7Z2Z2 1120 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 C10orf107Q8IVU9 208 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 LMNTD1Q8N9Z9 388 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CCDC63Q8NA47 563 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 OR2A1Q8NGT9 310 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 ZNF483Q8TF39 744 aaPredicted RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 EXT2Q93063 718 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 IL17FQ96PD4 163 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 TMEM237Q96Q45 408 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 SELENOSQ9BQE4 189 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 TRMOQ9BU70 441 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CAPS2Q9BXY5 557 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PITPNM3Q9BZ71 974 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 CHRNA10Q9GZZ6 450 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 XKR8Q9H6D3 395 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 DNAJC11Q9NVH1 559 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 INTS7Q9NVH2 962 aaKnown RBP11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 HRASLS2Q9NWW9 162 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PCTPQ9UKL6 214 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PLAGL1Q9UM63 463 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 STK38LQ9Y2H1 464 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 PCDHB11Q9Y5F2 797 aa11.57□□□□□ -0.56
PDLIM5-220ENST00000514830 KMT2BQ9UMN6 2715 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 CPED1A4D0V7 1026 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 OR6C74A6NCV1 312 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 KLF11O14901 512 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 TOX3O15405 576 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 NPHS1O60500 1241 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 UGDHO60701 494 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 DKK1O94907 266 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 FGF3P11487 239 aaPredicted RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 NPPBP16860 134 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 AMD1P17707 334 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 GRK2P25098 689 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 CASP2P42575 452 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 HSPA7P48741 367 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 AGTR2P50052 363 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 OR1D5P58170 312 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 RELAQ04206 551 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 PRDX1Q06830 199 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 CDC16Q13042 620 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 PRKAA1Q13131 559 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 FASTKQ14296 549 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 UNC50Q53HI1 259 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 PRAMEF13Q5VWM6 474 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 THOC6Q86W42 341 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 PLXDC1Q8IUK5 500 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 RSC1A1Q92681 617 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 PHF21BQ96EK2 531 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 WDR34Q96EX3 536 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 CNDP1Q96KN2 507 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 OR2A14Q96R47 310 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 OR4K3Q96R72 315 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 ATG10Q9H0Y0 220 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 EHD1Q9H4M9 534 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 SPHK1Q9NYA1 384 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 ACTR10Q9NZ32 417 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 ANKMY1Q9P2S6 941 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 OPTCQ9UBM4 332 aa11.56□□□□□ -0.56
PDLIM5-220ENST00000514830 CIDEBQ9UHD4 219 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms