RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 PMF1-BGLAPU3KQ54 211 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ANKRD66B4E2M5 251 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PDLIM1O00151 329 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 NRP1O14786 923 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TBX18O95935 607 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 NDUFS1P28331 727 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 HOXD13P35453 343 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TPTEP56180 551 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PDCD4Q53EL6 469 aaKnown RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 SNAP47Q5SQN1 464 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ADGRD2Q7Z7M1 963 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 PHTF2Q8N3S3 785 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 ZUFSPQ96AP4 578 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 CNDP2Q96KP4 475 aaKnown RBP12.19□□□□□ -0.46
COL11A1-210ENST00000512756 CDH7Q9ULB5 785 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
COL11A1-210ENST00000512756 A0A0U1RQF3 1178 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TMEM88BA6NKF7 163 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TMEM233B4DJY2 109 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TLR4O00206 839 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TPST2O60704 377 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 EBLN1P0CF75 366 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 EMX2Q04743 252 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CAMK1Q14012 370 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 MINDY4Q4G0A6 757 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 SMARCD3Q6STE5 483 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 QSOX2Q6ZRP7 698 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 LYSMD3Q7Z3D4 306 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PQLC3Q8N755 202 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 OR2AP1Q8NGE2 309 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 FATE1Q969F0 183 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CMTM7Q96FZ5 175 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 AURKBQ96GD4 344 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ZSWIM3Q96MP5 696 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ITPAQ9BY32 194 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 C9IYK1 514 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TYROBPO43914 113 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 EPOP01588 193 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 KCNA5P22460 613 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ALAS2P22557 587 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ARCN1P48444 511 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 STC1P52823 247 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PRMT2P55345 433 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 GJA9P57773 515 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TUBA3CQ13748 450 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PRAMEF14Q5SWL7 426 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PRAMEF13Q5VWM6 474 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ENDOVQ8N8Q3 282 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PLEKHO2Q8TD55 490 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 KLHL6Q8WZ60 621 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 COL21A1Q96P44 957 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ANKHQ9HCJ1 492 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 COMMD3Q9UBI1 195 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 OR14I1A6ND48 311 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 J3KR12 359 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 AKAP8O43823 692 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 H1F0P07305 194 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF823P16415 610 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ACSL1P33121 698 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ADAM17P78536 824 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 SP2Q02086 613 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CHRNA6Q15825 494 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 IDNKQ5T6J7 187 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 OR4F3Q6IEY1 312 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TUBA3EQ6PEY2 450 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 HFE2Q6ZVN8 426 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CILP2Q8IUL8 1156 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 GPR151Q8TDV0 419 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PYCR2Q96C36 320 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PYURFQ96I23 114 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CLCC1Q96S66 551 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CCM2Q9BSQ5 444 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 DCSTAMPQ9H295 470 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PLEKHA1Q9HB21 404 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 AASSQ9UDR5 926 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 SLC2A6Q9UGQ3 507 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 LOC100130705A0A1B0GUX0 176 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 MANBAO00462 879 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TLX3O43711 291 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PEPDP12955 493 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF30P17039 623 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 DGKQP52824 942 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 GBX2P52951 348 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ARF5P84085 180 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 RBM20Q5T481 1227 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 C2CD4AQ8NCU7 369 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 OR4F6Q8NGB9 312 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 PIGKQ92643 395 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 GFM1Q96RP9 751 aaKnown RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 CYP2S1Q96SQ9 504 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 TMEM175Q9BSA9 504 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 ZNF395Q9H8N7 513 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-210ENST00000512756 COPS7AQ9UBW8 275 aa12.18□□□□□ -0.46
COL11A1-210ENST00000512756 BHMG1C9JSJ3 638 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-210ENST00000512756 AVPR1BP47901 424 aa12.17□□□□□ -0.46
COL11A1-210ENST00000512756 CBLBQ13191 982 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms