RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 RUFY1Q96T51 708 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 OR52A5Q9H2C5 316 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 TRIT1Q9H3H1 467 aaKnown RBP9.18□□□□□ -0.94
SNF8-211ENST00000512243 CAB39LQ9H9S4 337 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 POPDC3Q9HBV1 291 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 NCKIPSDQ9NZQ3 722 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 GALPQ9UBC7 116 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 FTSJ1Q9UET6 329 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 DUSP13Q9UII6 198 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 MED16Q9Y2X0 877 aa9.18□□□□□ -0.94
SNF8-211ENST00000512243 A6NCN8 305 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 OR52A4PA6NMU1 304 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 TRIM49D1C9J1S8 452 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 TRIM38O00635 465 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 RASGRF2O14827 1237 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 PHGDHO43175 533 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 SIGLEC6O43699 453 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 NOBOXO60393 691 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CDH16O75309 829 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 TCEA3O75764 348 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SLCO2B1O94956 709 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 EML2O95834 649 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 RPN2P04844 631 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 GIMD1P0DJR0 217 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 MPC1LP0DKB6 136 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 MTHFD1P11586 935 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 CD59P13987 128 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 ZNF37AP17032 561 aaPredicted RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 GCAP28676 217 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CRABP2P29373 138 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 PDHA2P29803 388 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 MAPK9P45984 424 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SLCO1A2P46721 670 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 MAZP56270 477 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 IL2P60568 153 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 TIAL1Q01085 375 aaKnown RBP eCLIP9.17□□□□□ -0.94
SNF8-211ENST00000512243 KRT33BQ14525 404 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 ZNF460Q14592 562 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CLCA4Q14CN2 919 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 RPE65Q16518 533 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 C14orf28Q4W4Y0 310 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 IYDQ6PHW0 289 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 FBXO38Q6PIJ6 1188 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 PAQR3Q6TCH7 311 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 ABRAXAS1Q6UWZ7 409 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 NEK10Q6ZWH5 1172 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CCDC91Q7Z6B0 441 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CMC1Q7Z7K0 106 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 VRK3Q8IV63 474 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SLC35F3Q8IY50 421 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 NAGSQ8N159 534 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 MYO1HQ8N1T3 1032 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 NKAPQ8N5F7 415 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 ACVR1CQ8NER5 493 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 GPR156Q8NFN8 814 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SLC37A2Q8TED4 501 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 PATE1Q8WXA2 126 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 FAM122AQ96E09 287 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 LINGO1Q96FE5 620 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CNDP2Q96KP4 475 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 APOLD1Q96LR9 279 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CCDC74BQ96LY2 380 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 ROPN1BQ9BZX4 212 aaPredicted RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 ROPN1Q9HAT0 212 aaPredicted RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 SYTL2Q9HCH5 934 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 SNX15Q9NRS6 342 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 POT1Q9NUX5 634 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 IMP3Q9NV31 184 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 GPATCH2Q9NW75 528 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CTNNAL1Q9UBT7 734 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 TBK1Q9UHD2 729 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CDYLQ9Y232 598 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 BTBD3Q9Y2F9 522 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 WDR37Q9Y2I8 494 aa9.17□□□□□ -0.94
SNF8-211ENST00000512243 CFAP20Q9Y6A4 193 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 SNRNP200O75643 2136 aaKnown RBP9.17□□□□□ -0.94
SNF8-211ENST00000512243 TRBV23OR9-2A0A075B6M9 112 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 A0A087X1B8 175 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 TLDC2A0PJX2 215 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 PABPN1LA6NDY0 278 aaKnown RBP9.16□□□□□ -0.94
SNF8-211ENST00000512243 SH3BP5O60239 455 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 LDOC1O95751 146 aaPredicted RBP9.16□□□□□ -0.94
SNF8-211ENST00000512243 VIPP01282 170 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 BRAFP15056 766 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 ACADLP28330 430 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 NDUFS1P28331 727 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 TYK2P29597 1187 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 DUSP3P51452 185 aaPredicted RBP9.16□□□□□ -0.94
SNF8-211ENST00000512243 PGGT1BP53609 377 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
SNF8-211ENST00000512243 HHEXQ03014 270 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 ABRQ12979 859 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 DNAJC3Q13217 504 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 RASA2Q15283 850 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 KRT71Q3SY84 523 aa9.16□□□□□ -0.94
SNF8-211ENST00000512243 CAPRIN2Q6IMN6 1127 aaKnown RBP9.16□□□□□ -0.94
SNF8-211ENST00000512243 DUS1LQ6P1R4 473 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms