RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ASNA1O43681 348 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 ITGAMP11215 1152 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 ITGALP20701 1170 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 MCM3P25205 808 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 ACADLP28330 430 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 NR2C2P49116 596 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 LTBQ06643 244 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 OLIG2Q13516 323 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 GPR33Q49SQ1 333 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 E4F1Q66K89 784 aaPredicted RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 TAOK1Q7L7X3 1001 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 DMRTC2Q8IXT2 367 aaPredicted RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 GHDCQ8N2G8 530 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 ASB5Q8WWX0 329 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 ZUFSPQ96AP4 578 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 SELENOSQ9BQE4 189 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 CCM2LQ9NUG4 571 aaPredicted RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 ZDHHC3Q9NYG2 299 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 CAPN11Q9UMQ6 739 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 PPT2Q9UMR5 302 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 EDARQ9UNE0 448 aa11.02□□□□□ -0.65
RNF4-216ENST00000511859 LUC7L2Q9Y383 392 aaKnown RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 BZW2Q9Y6E2 419 aaKnown RBP11.02□□□□□ -0.65
RNF4-216ENST00000511859 IGLV3-16A0A075B6K0 115 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 HYKKA2RU49 373 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 LRRD1A4D1F6 860 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 ASPDHA6ND91 283 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 IDSB3KWA1 339 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 TARM1B6A8C7 271 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 NPIPA5E9PKD4 350 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 ADAM10O14672 748 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 NFKB1P19838 968 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 PEBP1P30086 187 aaKnown RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 GRIA3P42263 894 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 PLOD1Q02809 727 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 ZNF33BQ06732 778 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 FIGNQ5HY92 759 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 WASHC2DQ5SRD0 308 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 FIGLAQ6QHK4 219 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 NPNTQ6UXI9 565 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 NCCRP1Q6ZVX7 275 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 PID1Q7Z2X4 250 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 LAPTM4BQ86VI4 370 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 PRSS58Q8IYP2 241 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 TAB3Q8N5C8 712 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 METTL27Q8N6F8 245 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 IPMKQ8NFU5 416 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 LILRB4Q8NHJ6 448 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 OXNAD1Q96HP4 312 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 VAT1Q99536 393 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 FSD1LQ9BXM9 530 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 ZNF700Q9H0M5 742 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.01□□□□□ -0.65
RNF4-216ENST00000511859 NPIPA1Q9UND3 350 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 KLHL20Q9Y2M5 609 aa11.01□□□□□ -0.65
RNF4-216ENST00000511859 LOC102723996A0A087X1L8 192 aa11□□□□□ -0.65
RNF4-216ENST00000511859 ZWINTO95229 277 aa11□□□□□ -0.65
RNF4-216ENST00000511859 FKBP9O95302 570 aa11□□□□□ -0.65
RNF4-216ENST00000511859 CRTAMO95727 393 aa11□□□□□ -0.65
RNF4-216ENST00000511859 S1PR4O95977 384 aa11□□□□□ -0.65
RNF4-216ENST00000511859 CELA2AP08217 269 aa11□□□□□ -0.65
RNF4-216ENST00000511859 HOXD4P09016 255 aaPredicted RBP11□□□□□ -0.65
RNF4-216ENST00000511859 TPM1P09493 284 aa11□□□□□ -0.65
RNF4-216ENST00000511859 EEF1DP29692 281 aaKnown RBP11□□□□□ -0.65
RNF4-216ENST00000511859 ZBED6P86452 979 aa11□□□□□ -0.65
RNF4-216ENST00000511859 EEF1A2Q05639 463 aaKnown RBP11□□□□□ -0.65
RNF4-216ENST00000511859 WASHC5Q12768 1159 aa11□□□□□ -0.65
RNF4-216ENST00000511859 TBX2Q13207 712 aaPredicted RBP11□□□□□ -0.65
RNF4-216ENST00000511859 DSG2Q14126 1118 aa11□□□□□ -0.65
RNF4-216ENST00000511859 TRIM14Q14142 442 aa11□□□□□ -0.65
RNF4-216ENST00000511859 TMEM211Q6ICI0 200 aa11□□□□□ -0.65
RNF4-216ENST00000511859 NEK10Q6ZWH5 1172 aa11□□□□□ -0.65
RNF4-216ENST00000511859 BIVMQ86UB2 503 aa11□□□□□ -0.65
RNF4-216ENST00000511859 CPNE8Q86YQ8 564 aa11□□□□□ -0.65
RNF4-216ENST00000511859 FAM98AQ8NCA5 519 aaKnown RBP11□□□□□ -0.65
RNF4-216ENST00000511859 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
RNF4-216ENST00000511859 NANOS1Q8WY41 292 aaKnown RBP11□□□□□ -0.65
RNF4-216ENST00000511859 NRGNQ92686 78 aa11□□□□□ -0.65
RNF4-216ENST00000511859 IMMP1LQ96LU5 166 aa11□□□□□ -0.65
RNF4-216ENST00000511859 ZNF354BQ96LW1 612 aa11□□□□□ -0.65
RNF4-216ENST00000511859 TRIM51Q9BSJ1 452 aa11□□□□□ -0.65
RNF4-216ENST00000511859 TUBB6Q9BUF5 446 aa11□□□□□ -0.65
RNF4-216ENST00000511859 FAM96AQ9H5X1 160 aa11□□□□□ -0.65
RNF4-216ENST00000511859 KCNJ16Q9NPI9 418 aa11□□□□□ -0.65
RNF4-216ENST00000511859 KLHL8Q9P2G9 620 aaPredicted RBP11□□□□□ -0.65
RNF4-216ENST00000511859 CDC14AQ9UNH5 594 aa11□□□□□ -0.65
RNF4-216ENST00000511859 PHF3Q92576 2039 aaKnown RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 C3orf70A6NLC5 250 aaPredicted RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 AKR1B15C9JRZ8 316 aaPredicted RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 QSOX1O00391 747 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 RASGRF2O14827 1237 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 MFAP3LO75121 409 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 SLCO2B1O94956 709 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 AP2A2O94973 939 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 HEXBP07686 556 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 CD46P15529 392 aa10.99□□□□□ -0.65
RNF4-216ENST00000511859 FBLP22087 321 aaKnown RBP10.99□□□□□ -0.65
RNF4-216ENST00000511859 ACRV1P26436 265 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms