RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.99□□□□□ -1.61
PHF3-210ENST00000509876 MDGA1Q8NFP4 955 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 PJA1Q8NG27 643 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 KIAA1191Q96A73 305 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 LRRC46Q96FV0 321 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 GPR22Q99680 433 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 PELOQ9BRX2 385 aaKnown RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 MS4A12Q9NXJ0 267 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 LGALS13Q9UHV8 139 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 PLCL2Q9UPR0 1127 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SLC9A8Q9Y2E8 581 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 POLR1CO15160 346 aaPredicted RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 KIR3DL1P43629 444 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 NCBP2P52298 156 aaKnown RBP eCLIP4.99□□□□□ -1.61
PHF3-210ENST00000509876 MC1RQ01726 317 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 VAC14Q08AM6 782 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 KIR2DS3Q14952 304 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 LARS2Q15031 903 aaKnown RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 TMEM196Q5HYL7 178 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 DCAF12Q5T6F0 453 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 CXorf57Q6NSI4 855 aaKnown RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 PSAPL1Q6NUJ1 521 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SLC9A6Q92581 669 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 C5orf34Q96MH7 638 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SLC6A17Q9H1V8 727 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 GPRC5BQ9NZH0 403 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SRPK3Q9UPE1 567 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 TTC36A6NLP5 189 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 BBIP1A8MTZ0 92 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 LDB2O43679 373 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 NTRK1P04629 796 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 RPLP0P05388 317 aaKnown RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 C1SP09871 688 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 TARSP26639 723 aaKnown RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 SMIM11AP58511 58 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 IRX1P78414 480 aaPredicted RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 BST1Q10588 318 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 MANEAQ5SRI9 462 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 MANEALQ5VSG8 457 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 TRIM69Q86WT6 500 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SDR16C5Q8N3Y7 309 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 GAB3Q8WWW8 586 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 NSMCE2Q96MF7 247 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 PKMYT1Q99640 499 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 SYT11Q9BT88 431 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 RASSF4Q9H2L5 321 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 ACTL8Q9H568 366 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 C6orf106Q9H6K1 298 aaPredicted RBP4.99□□□□□ -1.61
PHF3-210ENST00000509876 TMEM184CQ9NVA4 438 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 MAT2BQ9NZL9 334 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 KLHL20Q9Y2M5 609 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 TEX264Q9Y6I9 313 aa4.99□□□□□ -1.61
PHF3-210ENST00000509876 AP3D1O14617 1153 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 AGR2O95994 175 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ITGA2P17301 1181 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CSNK2A2P19784 350 aaPredicted RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 OPRD1P41143 372 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CPA2P48052 419 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 SLC16A1P53985 500 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 RPS7P62081 194 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 ESRRGP62508 458 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CTBSQ01459 385 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ACSBG2Q5FVE4 666 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PDSS1Q5T2R2 415 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 GOLGA7Q7Z5G4 137 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ZNF527Q8NB42 609 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 ICA1LQ8NDH6 482 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CENPTQ96BT3 561 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MIEF2Q96C03 454 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PYCR2Q96C36 320 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CAMK1GQ96NX5 476 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CPNE7Q9UBL6 633 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 VPS29Q9UBQ0 182 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CA5BQ9Y2D0 317 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 POLR1DQ9Y2S0 133 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 A8MUA0 341 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 STX16-NPEPL1H3BU86 382 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 STX16O14662 325 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MAP2K7O14733 419 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TRIM24O15164 1050 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 PLRG1O43660 514 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 LYPLA1O75608 230 aaPredicted RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 ALPPP05187 535 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TFPIP10646 304 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MTHFD1P11586 935 aaKnown RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 F3P13726 295 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 NOS3P29474 1203 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CD68P34810 354 aaPredicted RBP4.98□□□□□ -1.61
PHF3-210ENST00000509876 IRF9Q00978 393 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 MTAPQ13126 283 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 GBX1Q14549 363 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 FRG2Q64ET8 278 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 C12orf40Q86WS4 652 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 IL17RCQ8NAC3 791 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CADM4Q8NFZ8 388 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 CKAP2Q8WWK9 683 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 KLHL6Q8WZ60 621 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 THAP11Q96EK4 314 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 TSSK3Q96PN8 268 aa4.98□□□□□ -1.61
PHF3-210ENST00000509876 FRG2BQ96QU4 278 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms