RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 VIPR1P32241 457 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 TMED1Q13445 227 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 GBX1Q14549 363 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 RAB39AQ14964 217 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 ACOX1Q15067 660 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 ANKDD1AQ495B1 522 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 TMTC4Q5T4D3 741 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 OR4F3Q6IEY1 312 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 ZNF551Q7Z340 670 aaPredicted RBP14.09□□□□□ -0.15
DDX41-208ENST00000507955 PROSER1Q86XN7 944 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 TBC1D21Q8IYX1 336 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 GOLM1Q8NBJ4 401 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 ZNF548Q8NEK5 533 aaPredicted RBP14.09□□□□□ -0.15
DDX41-208ENST00000507955 TMBIM1Q969X1 311 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 NXPE3Q969Y0 559 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 CXorf21Q9HAI6 301 aa14.09□□□□□ -0.15
DDX41-208ENST00000507955 NPPAP01160 153 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 ANXA6P08133 673 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 XPAP23025 273 aaPredicted RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 BMPR1AP36894 532 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 POLR2IP36954 125 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 RPS9P46781 194 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 NAE1Q13564 534 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 FXNQ16595 210 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 ARHGAP15Q53QZ3 475 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 BRAT1Q6PJG6 821 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 TMEM26Q6ZUK4 368 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PAPD5Q8NDF8 572 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 OR7A2PQ8NGA2 310 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 MCOLN3Q8TDD5 553 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 BPIFB1Q8TDL5 484 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 ABTB1Q969K4 478 aaPredicted RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 NCLNQ969V3 563 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 NRTNQ99748 197 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 SMPD3Q9NY59 655 aaPredicted RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 IL36AQ9UHA7 158 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 MAGEL2Q9UJ55 1249 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 U3KQV3 271 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 H3BMQ9 156 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 NOBOXO60393 691 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PRKD3O94806 890 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 C8GP07360 202 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PRKACGP22612 351 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 CAPGP40121 348 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 MTHFRP42898 656 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 SLC6A11P48066 632 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 EPHA5P54756 1037 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PTPN5P54829 565 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 DHCR24Q15392 516 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 XKR6Q5GH73 641 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 GPR107Q5VW38 600 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 STK32CQ86UX6 486 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 CACUL1Q86Y37 369 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 RAVER1Q8IY67 606 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 CLEC4FQ8N1N0 589 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PNPT1Q8TCS8 783 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 NETO1Q8TDF5 533 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 COG8Q96MW5 612 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 OSBPL6Q9BZF3 934 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 PAIP1Q9H074 479 aaKnown RBP14.08□□□□□ -0.16
DDX41-208ENST00000507955 POLR1BQ9H9Y6 1135 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 SMURF2Q9HAU4 748 aa14.08□□□□□ -0.16
DDX41-208ENST00000507955 MYO9BQ13459 2157 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 A0A1W2PPW3 197 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 PABPN1LA6NDY0 278 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 PRRT4C9JH25 899 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 EFCAB14O75071 495 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ETHE1O95571 254 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 SLC16A8O95907 504 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 IL6P05231 212 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 CDH1P12830 882 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ESRRGP62508 458 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 MAD2L1Q13257 205 aaPredicted RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 FRG2Q64ET8 278 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 USP51Q70EK9 711 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 PARS2Q7L3T8 475 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 PATL1Q86TB9 770 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 DHRSXQ8N5I4 330 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 OR8J3Q8NGG0 315 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 FNDC8Q8TC99 324 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ASZ1Q8WWH4 475 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 AP2M1Q96CW1 435 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 SAMD11Q96NU1 681 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 FRG2BQ96QU4 278 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 OR4K3Q96R72 315 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 DNAJC11Q9NVH1 559 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 IRAK3Q9Y616 596 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 DYTNA2CJ06 578 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ELFN1P0C7U0 828 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 CYP2A7P20853 494 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 S100A3P33764 101 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 NNMTP40261 264 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 ADARB1P78563 741 aaKnown RBP14.07□□□□□ -0.16
DDX41-208ENST00000507955 IRF8Q02556 426 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 FGD3Q5JSP0 725 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 PRSS36Q5K4E3 855 aa14.07□□□□□ -0.16
DDX41-208ENST00000507955 TMEM220Q6QAJ8 160 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms