RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 TSPAN10Q9H1Z9 355 aaPredicted RBP13.24□□□□□ -0.29
DDR1-260ENST00000507533 STMN3Q9NZ72 180 aa13.24□□□□□ -0.29
DDR1-260ENST00000507533 ZNF282Q9UDV7 671 aaPredicted RBP13.24□□□□□ -0.29
DDR1-260ENST00000507533 IGHV1-45A0A0A0MS14 117 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 FOXO6A8MYZ6 492 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 NPIPA5E9PKD4 350 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 E9PLN8 166 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 ZRANB2O95218 330 aaKnown RBP eCLIP13.23□□□□□ -0.29
DDR1-260ENST00000507533 ABOP16442 354 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 ZFXP17010 805 aaPredicted RBP13.23□□□□□ -0.29
DDR1-260ENST00000507533 IGFBP2P18065 325 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 EMP2P54851 167 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 ALDH6A1Q02252 535 aaKnown RBP13.23□□□□□ -0.29
DDR1-260ENST00000507533 ZNF33BQ06732 778 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 WASHC5Q12768 1159 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 OLIG2Q13516 323 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 C3P1Q6ZMU1 363 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 SNX20Q7Z614 316 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 LAPTM4BQ86VI4 370 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 DOLPP1Q86YN1 238 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 FCRL5Q96RD9 977 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 VKORC1Q9BQB6 163 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 SELENOSQ9BQE4 189 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 CCM2LQ9NUG4 571 aaPredicted RBP13.23□□□□□ -0.29
DDR1-260ENST00000507533 RIC8BQ9NVN3 520 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 ZDHHC3Q9NYG2 299 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 COQ3Q9NZJ6 369 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.23□□□□□ -0.29
DDR1-260ENST00000507533 KLHL8Q9P2G9 620 aaPredicted RBP13.23□□□□□ -0.29
DDR1-260ENST00000507533 PPT2Q9UMR5 302 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 NPIPA1Q9UND3 350 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
DDR1-260ENST00000507533 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ZNF487B1APH4 448 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 TTI1O43156 1089 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ZNHIT1O43257 154 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 AP2A1O95782 977 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 AGTP01019 485 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ITGALP20701 1170 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ACADLP28330 430 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ARHGAP25P42331 645 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 DYNLT1P63172 113 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
DDR1-260ENST00000507533 MPP3Q13368 585 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 FIGLAQ6QHK4 219 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 NEK10Q6ZWH5 1172 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 PID1Q7Z2X4 250 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 RFX6Q8HWS3 928 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 CLDN19Q8N6F1 224 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 AMER2Q8N7J2 671 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 OR13C4Q8NGS5 318 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 OR5K2Q8NHB8 316 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ZNF285Q96NJ3 590 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 DMRTA2Q96SC8 542 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 FSD1LQ9BXM9 530 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 ENAMQ9NRM1 1142 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 INTS7Q9NVH2 962 aaKnown RBP13.22□□□□□ -0.29
DDR1-260ENST00000507533 TEKT2Q9UIF3 430 aa13.22□□□□□ -0.29
DDR1-260ENST00000507533 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
DDR1-260ENST00000507533 PRRC2AP48634 2157 aaKnown RBP13.22□□□□□ -0.29
DDR1-260ENST00000507533 IGLV3-16A0A075B6K0 115 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 A0A1W2PQ72 361 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 HYKKA2RU49 373 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 C5orf60A6NFR6 353 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 C3orf70A6NLC5 250 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 IDSB3KWA1 339 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 ADAM10O14672 748 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 LIN7AO14910 233 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 KDM1AO60341 852 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 SLCO2B1O94956 709 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 MED26O95402 600 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 TSPAN12O95859 305 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 GSTM1P09488 218 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 ICAM2P13598 275 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 FOSL1P15407 271 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 CDKN1CP49918 316 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 HADHBP55084 474 aaKnown RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 VSX2P58304 361 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 AP2B1P63010 937 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 GSTM4Q03013 218 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 FOLH1Q04609 750 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 MESDQ14696 234 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 BRD3Q15059 726 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 WASHC2DQ5SRD0 308 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 CES4AQ5XG92 561 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 PRMT9Q6P2P2 845 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 C2orf73Q8N5S3 287 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 TFB1MQ8WVM0 346 aaKnown RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 NPDC1Q9NQX5 325 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 DLL4Q9NR61 685 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 TFR2Q9UP52 801 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 RPH3AQ9Y2J0 694 aaPredicted RBP13.21□□□□□ -0.29
DDR1-260ENST00000507533 VPS13CQ709C8 3753 aa13.21□□□□□ -0.29
DDR1-260ENST00000507533 ACANP16112 2415 aa13.21□□□□□ -0.3
DDR1-260ENST00000507533 IGLV3-12A0A075B6K2 115 aa13.2□□□□□ -0.3
DDR1-260ENST00000507533 RCCD1A6NED2 376 aa13.2□□□□□ -0.3
DDR1-260ENST00000507533 A8MUI8 341 aa13.2□□□□□ -0.3
DDR1-260ENST00000507533 PRRG2O14669 202 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms