RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 ARRDC3Q96B67 414 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 VPS50Q96JG6 964 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TSSK3Q96PN8 268 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ZNF382Q96SR6 550 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CHID1Q9BWS9 393 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RSPO3Q9BXY4 272 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MCOLN1Q9GZU1 580 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ABCG4Q9H172 646 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RPF2Q9H7B2 306 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SLC25A37Q9NYZ2 338 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GPRC5BQ9NZH0 403 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NUDT4Q9NZJ9 180 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 FADS3Q9Y5Q0 445 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SNX11Q9Y5W9 270 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SLC30A1Q9Y6M5 507 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 COL12A1Q99715 3063 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TRBV23OR9-2A0A075B6M9 112 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 H7C0S8 307 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PRMT5O14744 637 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 LSM1O15116 133 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PRAMEF10O60809 474 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PRKRAO75569 313 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ESR1P03372 595 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CISD3P0C7P0 127 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TNFRSF1BP20333 461 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PRKACGP22612 351 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 AKT1P31749 480 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 POLR2IP36954 125 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 IL12RB1P42701 662 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SPINT3P49223 89 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MAPK10P53779 464 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MC1RQ01726 317 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 DCTN2Q13561 401 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GTF2H2Q13888 395 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NFE2L1Q14494 772 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PTCHD3Q3KNS1 767 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SPANXN4Q5MJ08 99 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 EGFLAMQ63HQ2 1017 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GLYATQ6IB77 296 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GTF2H2CQ6P1K8 395 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PATL1Q86TB9 770 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NPAS3Q8IXF0 933 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RGL4Q8IZJ4 473 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 OFCC1Q8IZS5 231 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NXPE1Q8N323 547 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 DTWD1Q8N5C7 304 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PDZD8Q8NEN9 1154 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RHBDF1Q96CC6 855 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SCRN2Q96FV2 425 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NSMCE2Q96MF7 247 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RNF145Q96MT1 663 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 BDH2Q9BUT1 245 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 C2orf49Q9BVC5 232 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NPLQ9BXD5 320 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SEZ6LQ9BYH1 1024 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ACPTQ9BZG2 426 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MBNL1Q9NR56 388 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 HEBP1Q9NRV9 189 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 EBF1Q9UH73 591 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MAGEL2Q9UJ55 1249 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PPT2Q9UMR5 302 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ERVW-1Q9UQF0 538 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PCDHB3Q9Y5E6 796 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TNPO3Q9Y5L0 923 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 SCN3AQ9NY46 2000 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 DMXL2Q8TDJ6 3036 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TRIM64A6NGJ6 449 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 C16orf96A6NNT2 1141 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PARNO95453 639 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NTN1O95631 604 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 S100BP04271 92 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ADH1AP07327 375 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NUDT7P0C024 238 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MYCLP1P12525 358 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CDH1P12830 882 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 NUP107P57740 925 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CACNG1Q06432 222 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PIGFQ07326 219 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PCBP2Q15366 365 aaKnown RBP eCLIP4.47□□□□□ -1.692e-8■■■■■ 33.9
ATP2C1-212ENST00000507488 NR6A1Q15406 480 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 FXNQ16595 210 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CYBRD1Q53TN4 286 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 FBXO46Q6PJ61 603 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CYP20A1Q6UW02 462 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ENPP6Q6UWR7 440 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 PRR23BQ6ZRT6 265 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 DPP10Q8N608 796 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 AMER3Q8N944 861 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 DRAXINQ8NBI3 349 aaPredicted RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GPR156Q8NFN8 814 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 GLMNQ92990 594 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ISG20Q96AZ6 181 aaKnown RBP4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ISOC1Q96CN7 298 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 ECHDC3Q96DC8 303 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 MED8Q96G25 268 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 RAD9AQ99638 391 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 TMEM106CQ9BVX2 250 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 CLPBQ9H078 707 aa4.47□□□□□ -1.69
ATP2C1-212ENST00000507488 OR2AG1Q9H205 316 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms