RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 EXOC4Q96A65 974 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 ERO1AQ96HE7 468 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 NODALQ96S42 347 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 PIGQQ9BRB3 760 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 INPP5KQ9BT40 448 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 GTPBP2Q9BX10 602 aaKnown RBP3.14□□□□□ -1.91
LSM6-205ENST00000507449 BICC1Q9H694 974 aaKnown RBP3.14□□□□□ -1.91
LSM6-205ENST00000507449 XAB2Q9HCS7 855 aaKnown RBP3.14□□□□□ -1.91
LSM6-205ENST00000507449 ZNF334Q9HCZ1 680 aaPredicted RBP3.14□□□□□ -1.91
LSM6-205ENST00000507449 SIX2Q9NPC8 291 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 STUB1Q9UNE7 303 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 SNX7Q9UNH6 387 aa3.14□□□□□ -1.91
LSM6-205ENST00000507449 ZFP37Q9Y6Q3 630 aaPredicted RBP3.14□□□□□ -1.91
LSM6-205ENST00000507449 DOCK7Q96N67 2140 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 TRAV24A0A0B4J272 114 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 A4D1N5 150 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 ANKRD61A6NGH8 418 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 ERVV-2B6SEH9 535 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 ARPC2O15144 300 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 WDR46O15213 610 aaKnown RBP3.13□□□□□ -1.91
LSM6-205ENST00000507449 SELENOFO60613 162 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 FCGR3BO75015 233 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 SLC22A3O75751 556 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 DDHD2O94830 711 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 NADKO95544 446 aaPredicted RBP3.13□□□□□ -1.91
LSM6-205ENST00000507449 BAG3O95817 575 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 ERVK-10P10266 1014 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 IRF2P14316 349 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 CASTP20810 708 aaKnown RBP3.13□□□□□ -1.91
LSM6-205ENST00000507449 KRT2P35908 639 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 KCNJ1P48048 391 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 RGS7P49802 495 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 VAMP7P51809 220 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 MFAP3P55082 362 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 SCN1BQ07699 218 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 PTK6Q13882 451 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 NFE2L1Q14494 772 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 SQLEQ14534 574 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 HERC3Q15034 1050 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 E2F5Q15329 346 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 FAM174BQ3ZCQ3 159 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 NHSL2Q5HYW2 709 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 TXNRD3NBQ6F5E7 133 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 OTOAQ7RTW8 1153 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 SPATA21Q7Z572 469 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 NRARPQ7Z6K4 114 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 TIGD4Q8IY51 512 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 CDK20Q8IZL9 346 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 LGI2Q8N0V4 545 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 STPG4Q8N801 248 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.13□□□□□ -1.91
LSM6-205ENST00000507449 TM9SF4Q92544 642 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 OR2B2Q9GZK3 357 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 FGF21Q9NSA1 209 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 FAM118AQ9NWS6 357 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 ZNF624Q9P2J8 865 aaPredicted RBP3.13□□□□□ -1.91
LSM6-205ENST00000507449 TXNDC16Q9P2K2 825 aa3.13□□□□□ -1.91
LSM6-205ENST00000507449 IGHV4-61A0A0C4DH41 118 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 H0YAE9 185 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 ZNF197O14709 1029 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 SLC30A4O14863 429 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 ST8SIA3O43173 380 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 SLU7O95391 586 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 IGHV4-59P01825 116 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 GPIP06744 558 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 UMODP07911 640 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 SPP1P10451 314 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 CDH3P22223 829 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 CEACAM8P31997 349 aaPredicted RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 CTNNA1P35221 906 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 HSD17B3P37058 310 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 RPL21P46778 160 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 ALDH3A2P51648 485 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 MAZP56270 477 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 GPR17Q13304 367 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 NONOQ15233 471 aaKnown RBP eCLIP3.12□□□□□ -1.91
LSM6-205ENST00000507449 MEP1BQ16820 701 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 CDO1Q16878 200 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 TYSND1Q2T9J0 566 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 LRRC73Q5JTD7 316 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 SFMBT2Q5VUG0 894 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 NOTUMQ6P988 496 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 CYB5D1Q6P9G0 228 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 BTNL8Q6UX41 500 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 NHLRC1Q6VVB1 395 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 SLC26A9Q7LBE3 791 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 PIWIL3Q7Z3Z3 882 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 PIGZQ86VD9 579 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 NR2C2APQ86WQ0 139 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 KLHDC1Q8N7A1 406 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 KBTBD8Q8NFY9 601 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 TRIM58Q8NG06 486 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 P2RX5Q93086 422 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 ATP6V1E2Q96A05 226 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 CCDC114Q96M63 670 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 URM1Q9BTM9 101 aaKnown RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 MLPHQ9BV36 600 aaPredicted RBP3.12□□□□□ -1.91
LSM6-205ENST00000507449 PRRG4Q9BZD6 226 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 GSN-AS1Q9NRJ2 163 aa3.12□□□□□ -1.91
LSM6-205ENST00000507449 PHPT1Q9NRX4 125 aaPredicted RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms