RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CNSTQ6PJW8 725 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 Q6ZS92 163 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 OTOAQ7RTW8 1153 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 CUZD1Q86UP6 607 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 LRRC6Q86X45 466 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 MPP5Q8N3R9 675 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 RAB42Q8N4Z0 105 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 ZNF285Q96NJ3 590 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 MIPEPQ99797 713 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 WDR77Q9BQA1 342 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 IL22Q9GZX6 179 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 SLC26A1Q9H2B4 701 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 SOX17Q9H6I2 414 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 MRM3Q9HC36 420 aaKnown RBP11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 BFARQ9NZS9 450 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 ERRFI1Q9UJM3 462 aaPredicted RBP11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 NTNG1Q9Y2I2 539 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 PCDHGA10Q9Y5H3 936 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 CSAG2Q9Y5P2 127 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 MRFAP1Q9Y605 127 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 MAU2Q9Y6X3 613 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 FAM169AQ9Y6X4 670 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 HEATR5BQ9P2D3 2071 aa11.05□□□□□ -0.64
HMGCS1-204ENST00000507293 A0A0J9YVX5 310 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 FITM1A5D6W6 292 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 TARM1B6A8C7 271 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 KPNA5O15131 536 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 NIPSNAP2O75323 286 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 VAPBO95292 243 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 CBX6O95503 412 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 ARNTP27540 789 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 CCNFP41002 786 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 NPY2RP49146 381 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 RBBP7Q16576 425 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 HIF1AQ16665 826 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 KCTD19Q17RG1 926 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 FAM214AQ32MH5 1076 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 TUBB8Q3ZCM7 444 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 WASHC2DQ5SRD0 308 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 FRMPD2BQ6IN97 320 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 DRICH1Q6PGQ1 229 aaPredicted RBP11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 KIRREL2Q6UWL6 708 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 CES3Q6UWW8 571 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 GSTA5Q7RTV2 222 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 OR2L3Q8NG85 312 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 OR2A1Q8NGT9 310 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 HMGCLL1Q8TB92 370 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 UBE2Q2Q8WVN8 375 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 ZUFSPQ96AP4 578 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 NACC2Q96BF6 587 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 MFSD3Q96ES6 412 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 FOPNLQ96NB1 174 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 ENAMQ9NRM1 1142 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 SYBUQ9NX95 663 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 SPATA7Q9P0W8 599 aa11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 NXT1Q9UKK6 140 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 COPG1Q9Y678 874 aaKnown RBP11.04□□□□□ -0.64
HMGCS1-204ENST00000507293 UTP20O75691 2785 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 LOC105369274A0A096LPK9 316 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 LOC102723532A0A0G2JNH3 316 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 A0A1W2PPV9 198 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 HYKKA2RU49 373 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 ANKUB1A6NFN9 424 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 VSTM2BA6NLU5 285 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 GOLGA8KD6RF30 607 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 GOLGA8TH3BQL2 631 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 AP3B1O00203 1094 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 LDLRP01130 860 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 FMO4P31512 558 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 YBX1P67809 324 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 ELOAQ14241 798 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 FASTKQ14296 549 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 TYSND1Q2T9J0 566 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 IRAK1BP1Q5VVH5 260 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 MRNIPQ6NTE8 343 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 C4orf22Q6V702 233 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 RNF44Q7L0R7 432 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 LURAP1LQ8IV03 231 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 PARP9Q8IXQ6 854 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 PRSS58Q8IYP2 241 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 OR4N4Q8N0Y3 316 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 MAGEC3Q8TD91 643 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 PPP4R1Q8TF05 950 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 LPGAT1Q92604 370 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 FAM136AQ96C01 138 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 BIRC8Q96P09 236 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 MESP1Q9BRJ9 268 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 CRB3Q9BUF7 120 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 KIFC1Q9BW19 673 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 SEMA3GQ9NS98 782 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 IL1RAPL1Q9NZN1 696 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 DRG1Q9Y295 367 aaKnown RBP11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 KLK4Q9Y5K2 254 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 CPAMD8Q8IZJ3 1885 aa11.03□□□□□ -0.64
HMGCS1-204ENST00000507293 TCRBV7S3A2A0A539 114 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 OR2A25A4D2G3 310 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 ARHGEF33A8MVX0 844 aa11.02□□□□□ -0.65
HMGCS1-204ENST00000507293 GOLGA6L6A8MZA4 724 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms