RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 IGHV1OR21-1A0A087WYE8 117 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 OR5K3A6NET4 321 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 CBFA2T3O75081 653 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 SUPT7LO94864 414 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 UBXN7O94888 489 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 PROS1P07225 676 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 PNLIPP16233 465 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 TSPAN8P19075 237 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 ARRB2P32121 409 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 GPR3P46089 330 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 CDH13P55290 713 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 PPP1CAP62136 330 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 YBX1P67809 324 aaKnown RBP13.7□□□□□ -0.22
RNF4-208ENST00000507247 GUCY1A3Q02108 690 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 GTF2H2Q13888 395 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 PDK4Q16654 411 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 PRAMEF13Q5VWM6 474 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 NKAIN2Q5VXU1 208 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 GTF2H2CQ6P1K8 395 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 LCTLQ6UWM7 567 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 OOSP2Q86WS3 158 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 FAM20CQ8IXL6 584 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 TEX9Q8N6V9 391 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 Q8N9G6 341 aaPredicted RBP13.7□□□□□ -0.22
RNF4-208ENST00000507247 OR2A1Q8NGT9 310 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 IFI44Q8TCB0 444 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 DYDC1Q8WWB3 177 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 CKAP2Q8WWK9 683 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 ACAT2Q9BWD1 397 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 DNAJC11Q9NVH1 559 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 ACTR10Q9NZ32 417 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 FTSJ1Q9UET6 329 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 TAC3Q9UHF0 121 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 LAMA1P25391 3075 aa13.7□□□□□ -0.22
RNF4-208ENST00000507247 COL27A1Q8IZC6 1860 aaPredicted RBP13.7□□□□□ -0.22
RNF4-208ENST00000507247 A0A1B0GTL3 188 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 PIPSLA2A3N6 862 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 GSAPA4D1B5 854 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ISM1B1AKI9 464 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 PPP6CO00743 305 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 POLR3GO15318 223 aaPredicted RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 ITM2AO43736 263 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 PRAMEF4O60810 478 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 SERPINE1P05121 402 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 NEFHP12036 1026 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 UGT2B7P16662 529 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 NPPBP16860 134 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 CKMT2P17540 419 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 AMD1P17707 334 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 CCND1P24385 295 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 MDH1P40925 334 aaKnown RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 CAPZBP47756 277 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 CFHR1Q03591 330 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 CLCQ05315 142 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 BST1Q10588 318 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ASPHQ12797 758 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 THEMIS2Q5TEJ8 643 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 PRAMEF9Q5VWM5 478 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 FAM219BQ5XKK7 198 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 METTL2BQ6P1Q9 378 aaKnown RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 FRMD7Q6ZUT3 714 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 LSMEM2Q8N112 164 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 SNX31Q8N9S9 440 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 PPP1R14CQ8TAE6 165 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ZNF75CPQ92670 426 aaPredicted RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 NAT6Q93015 286 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 PPM1MQ96MI6 270 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 OR2A14Q96R47 310 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 CCDC3Q9BQI4 270 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 C20orf27Q9GZN8 174 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ABCG4Q9H172 646 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 MANSC1Q9H8J5 431 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ZNF395Q9H8N7 513 aaPredicted RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 SEMA4BQ9NPR2 832 aaPredicted RBP13.69□□□□□ -0.22
RNF4-208ENST00000507247 HRASLS2Q9NWW9 162 aa13.69□□□□□ -0.22
RNF4-208ENST00000507247 ZNF292O60281 2723 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 SPTBN4Q9H254 2564 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 C2orf74A8MZ97 194 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 OR7A17O14581 309 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 NPHS1O60500 1241 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 H2AFYO75367 372 aaKnown RBP13.68□□□□□ -0.22
RNF4-208ENST00000507247 LYPLA1O75608 230 aaPredicted RBP13.68□□□□□ -0.22
RNF4-208ENST00000507247 CHRNGP07510 517 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 EPB42P16452 691 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 ACP1P24666 158 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 CD1CP29017 333 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 PRDX3P30048 256 aaKnown RBP13.68□□□□□ -0.22
RNF4-208ENST00000507247 CSF2RBP32927 897 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 LSSP48449 732 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 DUSP3P51452 185 aaPredicted RBP13.68□□□□□ -0.22
RNF4-208ENST00000507247 CCL7P80098 99 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 GPLD1P80108 840 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 CDC16Q13042 620 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 RCN2Q14257 317 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 KIR2DS3Q14952 304 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 AMZ1Q400G9 498 aa13.68□□□□□ -0.22
RNF4-208ENST00000507247 CFAP157Q5JU67 520 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms