RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CYC1P08574 325 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 FGF5P12034 268 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ITGB6P18564 788 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TAC1P20366 129 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 CDH3P22223 829 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 CSF2RBP32927 897 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 CRHR1P34998 444 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RPA3P35244 121 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ARL4DP49703 201 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ALDH18A1P54886 795 aaKnown RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 LAPTM5Q13571 262 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TBCCQ15814 346 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 UAP1Q16222 522 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 BEND6Q5SZJ8 279 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 CACHD1Q5VU97 1274 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 GARNL3Q5VVW2 1013 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TLDC1Q6P9B6 456 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RAB11FIP2Q7L804 512 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PIWIL4Q7Z3Z4 852 aaKnown RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 CEP97Q8IW35 865 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 LRRC56Q8IYG6 542 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 SYTL1Q8IYJ3 562 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 OR4E2Q8NGC2 313 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ZNF480Q8WV37 535 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RSC1A1Q92681 617 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 UBE2E3Q969T4 207 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 MVB12AQ96EY5 273 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 OR2A14Q96R47 310 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RUFY1Q96T51 708 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 SLC30A3Q99726 388 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TBC1D10AQ9BXI6 508 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 C1QTNF3Q9BXJ4 246 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ZMYND15Q9H091 742 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 ACBD3Q9H3P7 528 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 NT5DC2Q9H857 520 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PSD3Q9NYI0 1048 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 STOX2Q9P2F5 926 aaPredicted RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 SERTAD3Q9UJW9 196 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PTBP2Q9UKA9 531 aaKnown RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PPT2Q9UMR5 302 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 TDRKHQ9Y2W6 561 aaKnown RBP8.17□□□□□ -1.1
PDGFC-205ENST00000506880 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
PDGFC-205ENST00000506880 GSAPA4D1B5 854 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 OR2A25A4D2G3 310 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CDRT15L2A8MXV6 281 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 GIPC1O14908 333 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 ATP8B1O43520 1251 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 SMIM24O75264 130 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 RFPL1O75677 317 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 JMJD7P0C870 316 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 PCSK2P16519 638 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 UGT2B7P16662 529 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 KRT15P19012 456 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 GNAZP19086 355 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 GCAP28676 217 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 IMPA1P29218 277 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 RBMS1P29558 406 aaKnown RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 AHRP35869 848 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 SERPINB5P36952 375 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CASP2P42575 452 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 SLC6A12P48065 614 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 PDX1P52945 283 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 ARSFP54793 590 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 RPS15AP62244 130 aaKnown RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 SLC18A2Q05940 514 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CAMK2BQ13554 666 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CSHL1Q14406 222 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 NAA30Q147X3 362 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 PCBP2Q15366 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 AMZ1Q400G9 498 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CRTC2Q53ET0 693 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 TNFAIP8L3Q5GJ75 292 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 PAGE2BQ5JRK9 111 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 DCAF12Q5T6F0 453 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 ICE2Q659A1 982 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 IRGCQ6NXR0 463 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 AGTRAPQ6RW13 159 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 TMEM207Q6UWW9 146 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 ZNF574Q6ZN55 896 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 C17orf64Q86WR6 236 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CENPLQ8N0S6 344 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 FBXO39Q8N4B4 442 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 Q8N9G6 341 aaPredicted RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 C19orf47Q8N9M1 422 aaKnown RBP8.16□□□□□ -1.1
PDGFC-205ENST00000506880 LINC01555Q8NAE3 123 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 OR2L3Q8NG85 312 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 OR4K1Q8NGD4 311 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 OR2A1Q8NGT9 310 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CFAP61Q8NHU2 1237 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 FLVCR1-AS1Q8TAF5 88 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 PROKR1Q8TCW9 393 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 MZB1Q8WU39 189 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 DLG3Q92796 817 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 NACC2Q96BF6 587 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 RHBDF1Q96CC6 855 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 WDR34Q96EX3 536 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 ATXN7L3BQ96GX2 97 aa8.16□□□□□ -1.1
PDGFC-205ENST00000506880 CCDC74BQ96LY2 380 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms