RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TSNARE1Q96NA8 513 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 TRAPPC9Q96Q05 1148 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 EGFL8Q99944 293 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 MRPL57Q9BQC6 102 aaKnown RBP12.39□□□□□ -0.43
TCOF1-210ENST00000506767 TMEM79Q9BSE2 394 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 INTS7Q9NVH2 962 aaKnown RBP12.39□□□□□ -0.43
TCOF1-210ENST00000506767 MKS1Q9NXB0 559 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 NUDT4Q9NZJ9 180 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 XPR1Q9UBH6 696 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 KLHL3Q9UH77 587 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 PCDHB11Q9Y5F2 797 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 KLK4Q9Y5K2 254 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 SPEGQ15772 3267 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 ADAMTS20P59510 1910 aa12.39□□□□□ -0.43
TCOF1-210ENST00000506767 A0A0J9YY10 115 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 FAM149AA5PLN7 773 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 NCF1BA6NI72 391 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 A8MU76 341 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 NCF1CA8MVU1 366 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 UBXN8O00124 270 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 RGS16O15492 202 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 GLRA3O75311 464 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 NCF1P14598 390 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 ST6GAL1P15907 406 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 NPPBP16860 134 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CDH3P22223 829 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 RPA3P35244 121 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CCT5P48643 541 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 YBX1P67809 324 aaKnown RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 PRDX1Q06830 199 aaKnown RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 FOXC1Q12948 553 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 SF1Q15637 639 aaKnown RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 C18orf21Q32NC0 220 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 PTCHD3Q3KNS1 767 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 SNAP47Q5SQN1 464 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 PHF19Q5T6S3 580 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 KIAA1614Q5VZ46 1190 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CAPN13Q6MZZ7 669 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 LCTLQ6UWM7 567 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 HDXQ7Z353 690 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 SRRM1Q8IYB3 904 aaKnown RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 C4orf33Q8N1A6 199 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 BANPQ8N9N5 519 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 OR2L3Q8NG85 312 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 OR4K3Q96R72 315 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 STRADBQ9C0K7 418 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CHRNA10Q9GZZ6 450 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 ZMYND15Q9H091 742 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 PCBD2Q9H0N5 130 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 MRPL46Q9H2W6 279 aaKnown RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 VIPAS39Q9H9C1 493 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CCDC177Q9NQR7 707 aaPredicted RBP12.38□□□□□ -0.43
TCOF1-210ENST00000506767 CD274Q9NZQ7 290 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 SENP1Q9P0U3 644 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 EMCNQ9ULC0 261 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 BTRCQ9Y297 605 aa12.38□□□□□ -0.43
TCOF1-210ENST00000506767 A0A1W2PNU3 283 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 SLC9B1P1A6NJY1 282 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 SUPT3HB4E1H0 165 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 TK2O00142 265 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 COPEO14579 308 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 SUPT3HO75486 399 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 RASSF9O75901 435 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 IPO13O94829 963 aaKnown RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ZBTB11O95625 1053 aaPredicted RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 CREB1P16220 341 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 NELFEP18615 380 aaKnown RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 GRIA3P42263 894 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 HSD11B2P80365 405 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ABATP80404 500 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 EIF3IQ13347 325 aaKnown RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ZIC1Q15915 447 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 PRAMEF13Q5VWM6 474 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ICE2Q659A1 982 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 C16orf46Q6P387 395 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 TRIM73Q86UV7 250 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 MARCH9Q86YJ5 346 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 FAM20CQ8IXL6 584 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 D2HGDHQ8N465 521 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 BMPERQ8N8U9 685 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 UBTD2Q8WUN7 234 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 EXT2Q93063 718 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ZUFSPQ96AP4 578 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ALKBH8Q96BT7 664 aaKnown RBP12.37□□□□□ -0.43
TCOF1-210ENST00000506767 PYCR2Q96C36 320 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 MED8Q96G25 268 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 APOPT1Q96IL0 206 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 SCYL1Q96KG9 808 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 MIPEPQ99797 713 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 TMBIM4Q9HC24 238 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 TAC3Q9UHF0 121 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 TMCO1Q9UM00 188 aa12.37□□□□□ -0.43
TCOF1-210ENST00000506767 CCDC187A0A096LP49 1063 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 IGKV1-8A0A0C4DH67 115 aa12.36□□□□□ -0.43
TCOF1-210ENST00000506767 TYROBPO43914 113 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms