RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FBXO6Q9NRD1 293 aaPredicted RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 SLC22A11Q9NSA0 550 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 INTS7Q9NVH2 962 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 DHCR7Q9UBM7 475 aaKnown RBP8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 PCYOX1Q9UHG3 505 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 FAM169AQ9Y6X4 670 aa8.71□□□□□ -1.02
PDLIM5-209ENST00000506632 FLNCQ14315 2725 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CCDC88CQ9P219 2028 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 PTPN13Q12923 2485 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 OR2A25A4D2G3 310 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ARGFXA6NJG6 315 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ARSFP54793 590 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 YBX1P67809 324 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 KCNC4Q03721 635 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 KLRB1Q12918 225 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CHAF1BQ13112 559 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 THOC5Q13769 683 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 FASTKQ14296 549 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CRYMQ14894 314 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ARHGAP19Q14CB8 494 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 PPP1R7Q15435 360 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 SF1Q15637 639 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ZC3H12BQ5HYM0 836 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 C1orf189Q5VU69 101 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 YOD1Q5VVQ6 348 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CYHR1Q6ZMK1 362 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ASB18Q6ZVZ8 466 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 RNF44Q7L0R7 432 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CREG2Q8IUH2 290 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 SPNS2Q8IVW8 549 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 RAB42Q8N4Z0 105 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 TMEM102Q8N9M5 508 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 OR9A1PQ8NGU1 263 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 OR2Y1Q8NGV0 311 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CD200R1Q8TD46 325 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CALML6Q8TD86 181 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 SKA2Q8WVK7 121 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ASB11Q8WXH4 323 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 DLG3Q92796 817 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 MIPEPQ99797 713 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 FAM167BQ9BTA0 163 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 DDX47Q9H0S4 455 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 PLAC1Q9HBJ0 212 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 TXLNGQ9NUQ3 528 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 FBXO5Q9UKT4 447 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 PADI2Q9Y2J8 665 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 DHRS7Q9Y394 339 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 COMMD10Q9Y6G5 202 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 TNRC6AQ8NDV7 1962 aaKnown RBP8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 PCM1Q15154 2024 aa8.7□□□□□ -1.02
PDLIM5-209ENST00000506632 LRRK2Q5S007 2527 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 IGKV1-8A0A0C4DH67 115 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 A0A1B0GX78 115 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 CTAGE9A4FU28 777 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 E5RI56 91 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 GFYI3L273 518 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 EIF3FO00303 357 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 DSCR3O14972 297 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 FANCGO15287 622 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 NRP2O60462 931 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SRPX2O60687 465 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 HAUS5O94927 633 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TTC4O95801 387 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 CATP04040 527 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 UMODP07911 640 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 CD63P08962 238 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MPC1LP0DKB6 136 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 ENO3P13929 434 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 PGAM1P18669 254 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MCM3P25205 808 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SKIV2L2P42285 1042 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MPP1Q00013 466 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TIAL1Q01085 375 aaKnown RBP eCLIP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 DHX9Q08211 1270 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 ATP1A4Q13733 1029 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SSPNQ14714 243 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 NAA25Q14CX7 972 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TTLL9Q3SXZ7 439 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MSS51Q4VC12 460 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 HSP90AA5PQ58FG0 334 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TCTE1Q5JU00 501 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MED25Q71SY5 747 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 COX15Q7KZN9 410 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 MRGPREQ86SM8 312 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 KCNMB4Q86W47 210 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 RAB43Q86YS6 212 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 TMEM151BQ8IW70 566 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 CNTN4Q8IWV2 1026 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 C2CD4AQ8NCU7 369 aaPredicted RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SMPDL3AQ92484 453 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 FKBP10Q96AY3 582 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 IP6K3Q96PC2 410 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 GPR21Q99679 349 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 EBNA1BP2Q99848 306 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 SELENOSQ9BQE4 189 aa8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 WDR83Q9BRX9 315 aaKnown RBP8.69□□□□□ -1.02
PDLIM5-209ENST00000506632 AARSD1Q9BTE6 412 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms