RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 MIPEPQ99797 713 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 SEMA3GQ9NS98 782 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 SYBUQ9NX95 663 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 SPATA7Q9P0W8 599 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 FBXL4Q9UKA2 621 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 VPS9D1Q9Y2B5 631 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 RELNP78509 3460 aa11.55□□□□□ -0.56
PDLIM7-214ENST00000505746 MAGEB16A2A368 324 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 HYKKA2RU49 373 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CTSVO60911 334 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 MATN4O95460 622 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 DDAH2O95865 285 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 OGNP20774 298 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 ARNTP27540 789 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CMPK1P30085 196 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 FOXL2P58012 376 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CCSMST1Q4G0I0 132 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 ANKRD20A4Q4UJ75 823 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 C4orf17Q53FE4 359 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CTSL3PQ5NE16 218 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 PRAMEF13Q5VWM6 474 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 KIAA0930Q6ICG6 404 aaPredicted RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 PRMT9Q6P2P2 845 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CISD2Q8N5K1 135 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 OR2A1Q8NGT9 310 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 OR9A1PQ8NGU1 263 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 LPGAT1Q92604 370 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 C19orf60Q96EN9 201 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 SPSB2Q99619 263 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 KCNF1Q9H3M0 494 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 ZNF304Q9HCX3 659 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 SLC6A20Q9NP91 592 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 FAM114A2Q9NRY5 505 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 ZC3H7BQ9UGR2 993 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 CRYL1Q9Y2S2 319 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 COL12A1Q99715 3063 aa11.54□□□□□ -0.56
PDLIM7-214ENST00000505746 A0A0J9YVX5 310 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 VSTM2BA6NLU5 285 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ZNF839A8K0R7 811 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 GOLGA8KD6RF30 607 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 E5RI56 91 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 GOLGA8TH3BQL2 631 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 MASP2O00187 686 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 SOCS6O14544 535 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 PHF2O75151 1096 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 NIPSNAP2O75323 286 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 SEMA7AO75326 666 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 EIF2S1P05198 315 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 PKMP14618 531 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 PSMB5P28074 263 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 HSD17B2P37059 387 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 OR1D4P47884 311 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 GLRBP48167 497 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 CARSP49589 748 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 OCA2Q04671 838 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 GBX1Q14549 363 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ARHGAP19Q14CB8 494 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 NR6A1Q15406 480 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 RBBP7Q16576 425 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 TUBB8Q3ZCM7 444 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 AGAP7PQ5VUJ5 663 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 FRMPD2BQ6IN97 320 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 CASC4Q6P4E1 433 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 KIRREL2Q6UWL6 708 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 Q6ZS92 163 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 COX15Q7KZN9 410 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 RNF44Q7L0R7 432 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 COG1Q8WTW3 980 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 SMPDL3AQ92484 453 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 TRIM44Q96DX7 344 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ZFYVE21Q9BQ24 234 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 DPH7Q9BTV6 452 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 SOX17Q9H6I2 414 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 ASF1BQ9NVP2 202 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 INTS10Q9NVR2 710 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 UTP6Q9NYH9 597 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 SAMD15Q9P1V8 674 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 CTSFQ9UBX1 484 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 PLEKHB1Q9UF11 243 aaPredicted RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 HS3ST3B1Q9Y662 390 aa11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 COPG1Q9Y678 874 aaKnown RBP11.53□□□□□ -0.56
PDLIM7-214ENST00000505746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 A0A1W2PPV9 198 aa11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 TCRBV7S3A2A0A539 114 aa11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 OR2A25A4D2G3 310 aa11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 PRPF4O43172 522 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 VPS26AO75436 327 aa11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
PDLIM7-214ENST00000505746 CBX6O95503 412 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms