RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 ERVMER34-1Q9H9K5 563 aa3.39□□□□□ -1.87
CHD1-203ENST00000505657 PIH1D3Q9NQM4 214 aaKnown RBP3.39□□□□□ -1.87
CHD1-203ENST00000505657 CLIC5Q9NZA1 410 aa3.39□□□□□ -1.87
CHD1-203ENST00000505657 CPSF3Q9UKF6 684 aaKnown RBP3.39□□□□□ -1.87
CHD1-203ENST00000505657 ANGPTL3Q9Y5C1 460 aa3.39□□□□□ -1.87
CHD1-203ENST00000505657 A0A1B0GU03 582 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 SYNDIG1LA6NDD5 238 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 CCL24O00175 119 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 TCERG1O14776 1098 aaKnown RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 ZNF500O60304 480 aaPredicted RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 SERPINB2P05120 415 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 CSN3P07498 182 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 ACHEP22303 614 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 CCR10P46092 362 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 IRX1P78414 480 aaPredicted RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 NUCB1Q02818 461 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 CALD1Q05682 793 aaKnown RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 TEAD2Q15562 447 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 XKR6Q5GH73 641 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 TCTE1Q5JU00 501 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 IL17RELQ6ZVW7 336 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 PTAR1Q7Z6K3 402 aaPredicted RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 MARVELD2Q8N4S9 558 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 KLHDC1Q8N7A1 406 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 PI4KAP1Q8N8J0 262 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 VANGL1Q8TAA9 524 aaPredicted RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 MRGPRDQ8TDS7 321 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 ATL1Q8WXF7 558 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 WBP1Q96G27 269 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 FAM71F1Q96KD3 344 aaPredicted RBP3.38□□□□□ -1.87
CHD1-203ENST00000505657 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 DNAJC4Q9NNZ3 241 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 BARHL2Q9NY43 387 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 BCCIPQ9P287 314 aaKnown RBP eCLIP3.38□□□□□ -1.87
CHD1-203ENST00000505657 STK26Q9P289 416 aa3.38□□□□□ -1.87
CHD1-203ENST00000505657 KRTAP16-1A8MUX0 517 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 SLCO1B7G3V0H7 640 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 ARPC2O15144 300 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 TBX10O75333 385 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 DUS4LO95620 317 aaKnown RBP3.37□□□□□ -1.87
CHD1-203ENST00000505657 GGPS1O95749 300 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 CSTF2P33240 577 aaKnown RBP eCLIP3.37□□□□□ -1.87
CHD1-203ENST00000505657 LBX1P52954 281 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 UBASH3AP57075 661 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 RBPJQ06330 500 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 PRPF4BQ13523 1007 aaKnown RBP3.37□□□□□ -1.87
CHD1-203ENST00000505657 TNIP1Q15025 636 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 EXT1Q16394 746 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 SLC35D3Q5M8T2 416 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 ARMC4Q5T2S8 1044 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 KRT39Q6A163 491 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 UGT3A1Q6NUS8 523 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 Q6ZRP5 223 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 DET1Q7L5Y6 550 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 LGI2Q8N0V4 545 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 DBF4BQ8NFT6 615 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 OR4K1Q8NGD4 311 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 OR13C3Q8NGS6 347 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 OR1L3Q8NH93 324 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 SMAP2Q8WU79 429 aaPredicted RBP3.37□□□□□ -1.87
CHD1-203ENST00000505657 HDAC11Q96DB2 347 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 MAGED4Q96JG8 741 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 C10orf90Q96M02 699 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 SERINC2Q96SA4 455 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 OPRPNQ99935 248 aaPredicted RBP3.37□□□□□ -1.87
CHD1-203ENST00000505657 FUCA2Q9BTY2 467 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 P2RY12Q9H244 342 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 CDH20Q9HBT6 801 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 TERF2IPQ9NYB0 399 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 ASIC3Q9UHC3 531 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 GRID1Q9ULK0 1009 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 WDR37Q9Y2I8 494 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 TTLL3Q9Y4R7 772 aa3.37□□□□□ -1.87
CHD1-203ENST00000505657 IGKV3D-15A0A087WSY6 115 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 SERINC4A6NH21 518 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 CASTOR2A6NHX0 329 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 A8MXE2 369 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 AP5Z1O43299 807 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 MOCS3O95396 460 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 SEC24AO95486 1093 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 FYNP06241 537 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 IRF2P14316 349 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 OPRL1P41146 370 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 LEPRP48357 1165 aaKnown RBP3.36□□□□□ -1.87
CHD1-203ENST00000505657 VEGFCP49767 419 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 ASCL1P50553 236 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 RAB28P51157 221 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 LIMK1P53667 647 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 CLDN15P56746 228 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 HERV-K104P61576 105 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 NPTX1Q15818 432 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 KRBOX4Q5JUW0 171 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 FBXL22Q6P050 247 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 SLC25A47Q6Q0C1 308 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 KRT74Q7RTS7 529 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 RAB42Q8N4Z0 105 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 CCDC89Q8N998 374 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 CCDC191Q8NCU4 936 aa3.36□□□□□ -1.87
CHD1-203ENST00000505657 MRPS27Q92552 414 aaKnown RBP3.36□□□□□ -1.87
CHD1-203ENST00000505657 VPS33AQ96AX1 596 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms