RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 TFEBP19484 476 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 GRIA3P42263 894 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 MC2RQ01718 297 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRDX1Q06830 199 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 TAF1BQ53T94 588 aaPredicted RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 KIAA1614Q5VZ46 1190 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 VN1R5Q7Z5H4 357 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR8K5Q8NH50 307 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 SMPDL3AQ92484 453 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATP6V1G3Q96LB4 118 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 DDA1Q9BW61 102 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 INTS7Q9NVH2 962 aaKnown RBP7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCL27Q9Y4X3 112 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 NEUROG3Q9Y4Z2 214 aa7.99□□□□□ -1.13
CDC42SE2-208ENST00000505065 A0A0J9YY10 115 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 NPHS1O60500 1241 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZWINTO95229 277 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PROS1P07225 676 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 OAS2P29728 719 aaKnown RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TRAF3Q13114 568 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 UNC50Q53HI1 259 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 AGTRAPQ6RW13 159 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 CTAGE3PQ8IX95 158 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PAF1Q8N7H5 531 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 WDR20Q8TBZ3 569 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 LRFN5Q96NI6 719 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM9Q9P0T7 183 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 C2orf74A8MZ97 194 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 HMGB1P1B2RPK0 211 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 SCELO95171 688 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 CPNE6O95741 557 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 HOXB3P14651 431 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 KRT4P19013 534 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TYK2P29597 1187 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PBLDP30039 288 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TBPL1P62380 186 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRTGQ2VWP7 1150 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 MANEAQ5SRI9 462 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 C10orf62Q5T681 223 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 CREB3L4Q8TEY5 395 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC22A18Q96BI1 424 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 ARL8AQ96BM9 186 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 FERD3LQ96RJ6 166 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZBTB26Q9HCK0 441 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PSMD13Q9UNM6 376 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 CACNA1HO95180 2353 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMX2-CTNND1H3BSU7 103 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 DUX1O43812 170 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 FGF4P08620 206 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 EZRP15311 586 aaKnown RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 ITGAXP20702 1163 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 MRPL19P49406 292 aaKnown RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PPP1CAP62136 330 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 FRMD7Q6ZUT3 714 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 TBC1D1Q86TI0 1168 aaPredicted RBP7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 RHBDD1Q8TEB9 315 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 HAUS8Q9BT25 410 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC32A1Q9H598 525 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 PCDHB11Q9Y5F2 797 aa7.98□□□□□ -1.13
CDC42SE2-208ENST00000505065 H0YIV9 168 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 KLHL18O94889 574 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 DLGAP3O95886 979 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 VIPP01282 170 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 PRDX3P30048 256 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 WDR4P57081 412 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ABRQ12979 859 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 PUM1Q14671 1186 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ISXQ2M1V0 245 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 UGT3A2Q3SY77 523 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ICE2Q659A1 982 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 RD3Q7Z3Z2 195 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 GPSM1Q86YR5 675 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 MCOLN3Q8TDD5 553 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 USP7Q93009 1102 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF501Q96CX3 271 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM237Q96Q45 408 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 OR2A5Q96R48 311 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ZNF382Q96SR6 550 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TMEM184CQ9NVA4 438 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ARGLU1Q9NWB6 273 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 KCNK4Q9NYG8 393 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 XPR1Q9UBH6 696 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 RUVBL2Q9Y230 463 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ASF1AQ9Y294 204 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 DNAJC16Q9Y2G8 782 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 CFAP54Q96N23 3096 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 TK2O00142 265 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 UBFD1O14562 309 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 CCNDBP1O95273 360 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 BPGMP07738 259 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ALOX15P16050 662 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 ATP5F1P24539 256 aaPredicted RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 EIF3IQ13347 325 aaKnown RBP7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 CSHL1Q14406 222 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 MBOAT1Q6ZNC8 495 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 OOSP2Q86WS3 158 aa7.97□□□□□ -1.13
CDC42SE2-208ENST00000505065 SLC22A9Q8IVM8 553 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms