RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 NPY2RP49146 381 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 TTPAP49638 278 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 PGDP52209 483 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 GPS1Q13098 491 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 ACSBG2Q5FVE4 666 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 SP5Q6BEB4 398 aaPredicted RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 PTRHD1Q6GMV3 140 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 ZNF549Q6P9A3 640 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 UNC5DQ6UXZ4 953 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 MCATQ8IVS2 390 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 METTL27Q8N6F8 245 aaPredicted RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 RBMXL3Q8N7X1 1067 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 COG1Q8WTW3 980 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 SLC25A23Q9BV35 468 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 MRM3Q9HC36 420 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 ZBTB20Q9HC78 741 aaPredicted RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 GNPTGQ9UJJ9 305 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 PLCL2Q9UPR0 1127 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 ZKSCAN5Q9Y2L8 839 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 CRYL1Q9Y2S2 319 aa12.6□□□□□ -0.39
DDX41-204ENST00000504807 PCDHGA9Q9Y5G4 932 aaKnown RBP12.6□□□□□ -0.39
DDX41-204ENST00000504807 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.59□□□□□ -0.39
DDX41-204ENST00000504807 LOC105369274A0A096LPK9 316 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 LOC102723532A0A0G2JNH3 316 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 ZCWPW2A0A1B0GU75 182 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 ARHGEF33A8MVX0 844 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 GOLGA8MH3BSY2 632 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 KRT14P02533 472 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 NKAIN1Q4KMZ8 207 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 AARS2Q5JTZ9 985 aaKnown RBP12.59□□□□□ -0.39
DDX41-204ENST00000504807 FIGLAQ6QHK4 219 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 DENND6AQ8IWF6 608 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 REXO1L1PQ8IX06 675 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 GPR135Q8IZ08 494 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 OR4N4Q8N0Y3 316 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 TRIM58Q8NG06 486 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 OR2A1Q8NGT9 310 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 ZNF285Q96NJ3 590 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 MIPEPQ99797 713 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 SLC6A20Q9NP91 592 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 SLAMF7Q9NQ25 335 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
DDX41-204ENST00000504807 PTRH2Q9Y3E5 179 aaKnown RBP12.59□□□□□ -0.39
DDX41-204ENST00000504807 IGKV1-8A0A0C4DH67 115 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 NDUFS3O75489 264 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 MATN4O95460 622 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 S1PR4O95977 384 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 MAGEA3P43357 314 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 CLCN7P51798 805 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
DDX41-204ENST00000504807 KIAA0930Q6ICG6 404 aaPredicted RBP12.58□□□□□ -0.4
DDX41-204ENST00000504807 SHISA6Q6ZSJ9 500 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 HOOK3Q86VS8 718 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 CILP2Q8IUL8 1156 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 OR2L3Q8NG85 312 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 SEC14L1Q92503 715 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 INPP5DQ92835 1189 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 LURAP1Q96LR2 239 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 SPSB2Q99619 263 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 SLC7A5P2Q9GIP4 190 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 PLAC1Q9HBJ0 212 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 IFT80Q9P2H3 777 aaPredicted RBP12.58□□□□□ -0.4
DDX41-204ENST00000504807 CTSFQ9UBX1 484 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 ANAPC5Q9UJX4 755 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 CSAG2Q9Y5P2 127 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.4
DDX41-204ENST00000504807 SVILO95425 2214 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 C9J4A7 227 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 BANF1O75531 89 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 CBX6O95503 412 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 ERGP11308 486 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 AGXTP21549 392 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 COILP38432 576 aaPredicted RBP12.57□□□□□ -0.4
DDX41-204ENST00000504807 OR1D4P47884 311 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 TIAL1Q01085 375 aaKnown RBP eCLIP12.57□□□□□ -0.4
DDX41-204ENST00000504807 CTBP1Q13363 440 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 CUL1Q13616 776 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 TMED2Q15363 201 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 SF1Q15637 639 aaKnown RBP12.57□□□□□ -0.4
DDX41-204ENST00000504807 CYP1B1Q16678 543 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 ANKRD20A4Q4UJ75 823 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 SLC6A19Q695T7 634 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 JMJD6Q6NYC1 403 aaPredicted RBP12.57□□□□□ -0.4
DDX41-204ENST00000504807 TLDC1Q6P9B6 456 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 SUSD1Q6UWL2 747 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 TTLL10Q6ZVT0 673 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 OTOAQ7RTW8 1153 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 MMP21Q8N119 569 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 OTUD6BQ8N6M0 293 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 PPFIBP2Q8ND30 876 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 OR2Y1Q8NGV0 311 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 HMGCLL1Q8TB92 370 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 PROKR1Q8TCW9 393 aa12.57□□□□□ -0.4
DDX41-204ENST00000504807 N4BP2L2Q92802 583 aaPredicted RBP12.57□□□□□ -0.4
DDX41-204ENST00000504807 ZNF669Q96BR6 464 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms