RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CLPPQ16740 277 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 FAM83EQ2M2I3 478 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TSNAXIP1Q2TAA8 658 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 N4BP2L1Q5TBK1 243 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 LGSNQ5TDP6 509 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 KIAA1614Q5VZ46 1190 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ANKS6Q68DC2 871 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM71Q6P5X7 295 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SUSD1Q6UWL2 747 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RAPH1Q70E73 1250 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TAOK1Q7L7X3 1001 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PRSS42Q7Z5A4 293 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TBC1D1Q86TI0 1168 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 FAM129CQ86XR2 697 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ABHD11Q8NFV4 315 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 OR2L3Q8NG85 312 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 OR4D9Q8NGE8 314 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TCP10LQ8TDR4 215 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 KLHL6Q8WZ60 621 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SH3KBP1Q96B97 665 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PYCR2Q96C36 320 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 L3HYPDHQ96EM0 354 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SLC41A2Q96JW4 573 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CABS1Q96KC9 395 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ATP6V1G3Q96LB4 118 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF285Q96NJ3 590 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TMEM237Q96Q45 408 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 MRPL57Q9BQC6 102 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SPRY4Q9C004 299 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 C20orf27Q9GZN8 174 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 AICDAQ9GZX7 198 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ATG10Q9H0Y0 220 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 MRPL46Q9H2W6 279 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SEMA6CQ9H3T2 930 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 EPB41L1Q9H4G0 881 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TNFRSF12AQ9NP84 129 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SLC6A20Q9NP91 592 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CUEDC1Q9NWM3 386 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 HRASLS2Q9NWW9 162 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SENP1Q9P0U3 644 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CPSF2Q9P2I0 782 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 DCDC2Q9UHG0 476 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PCTPQ9UKL6 214 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ATXN7L1Q9ULK2 861 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 DOLKQ9UPQ8 538 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 IKBKGQ9Y6K9 419 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 BSNQ9UPA5 3926 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC88CQ9P219 2028 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 KCNE1BA0A087WTH5 132 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 DCDC2BA2VCK2 349 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 OR6C74A6NCV1 312 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 STX16-NPEPL1H3BU86 382 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 UBFD1O14562 309 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 DYNC1I1O14576 645 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 STX16O14662 325 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TOX3O15405 576 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CAPN5O15484 640 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RGS16O15492 202 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ATP8B1O43520 1251 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 HYAL3O43820 417 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CTSVO60911 334 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SPAG7O75391 227 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RFPL3O75679 317 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 GUCA1CO95843 209 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 MT-ND3P03897 115 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PROS1P07225 676 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RBP1P09455 135 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 FGF3P11487 239 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PVRP15151 417 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 UGT2B7P16662 529 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 POLR2CP19387 275 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CYP2A7P20853 494 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ALDH4A1P30038 563 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 GRIA3P42263 894 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 CASP2P42575 452 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 HNMTP50135 292 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 DUSP3P51452 185 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PRKAA2P54646 552 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ALDH18A1P54886 795 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SLC12A2P55011 1212 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 MAGOHP61326 146 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SIM1P81133 766 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 RELAQ04206 551 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 PRDX1Q06830 199 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 IFFO1Q0D2I5 559 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 KIR2DS3Q14952 304 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SLC5A12Q1EHB4 618 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ISXQ2M1V0 245 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 INAVAQ3KP66 663 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 UNC50Q53HI1 259 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 TAF1BQ53T94 588 aaPredicted RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 AGBL2Q5U5Z8 902 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 ADNP2Q6IQ32 1131 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 METTL2BQ6P1Q9 378 aaKnown RBP4.76□□□□□ -1.65
LMNB1-208ENST00000504788 FBXO42Q6P3S6 717 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 SPESP1Q6UW49 350 aa4.76□□□□□ -1.65
LMNB1-208ENST00000504788 LCTLQ6UWM7 567 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms