RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 RPA3P35244 121 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 HSPA7P48741 367 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 INHBCP55103 352 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 TBPL1P62380 186 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 CDKL1Q00532 357 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ZFP36L1Q07352 338 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 TARDBPQ13148 414 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 KIR2DS3Q14952 304 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ARHGAP19Q14CB8 494 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 C16orf72Q14CZ0 275 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 SF1Q15637 639 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ISXQ2M1V0 245 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 THEMIS2Q5TEJ8 643 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 KIAA1614Q5VZ46 1190 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 SPESP1Q6UW49 350 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 RAB44Q7Z6P3 723 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 EXOC3L1Q86VI1 746 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 TMEM151AQ8N4L1 468 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 BANPQ8N9N5 519 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 OR2A1Q8NGT9 310 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 OR56A3Q8NH54 315 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 RHEBL1Q8TAI7 183 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 HMGCLL1Q8TB92 370 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ARL8AQ96BM9 186 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 TWSG1Q9GZX9 223 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 RAB33BQ9H082 229 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ACSS2Q9NR19 701 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 INTS7Q9NVH2 962 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 WWOXQ9NZC7 414 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 EPHA6Q9UF33 1036 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 TAC3Q9UHF0 121 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 DCDC2Q9UHG0 476 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 CLCA2Q9UQC9 943 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 MN1Q10571 1320 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 SNRNP200O75643 2136 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 FAM208BQ5VWN6 2430 aa12.8□□□□□ -0.36
PDLIM7-212ENST00000504380 PCM1Q15154 2024 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 KIF26BQ2KJY2 2108 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PKD1L2Q7Z442 2459 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 MAP2K7O14733 419 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 NRP2O60462 931 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 GLRA3O75311 464 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 S100BP04271 92 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 MYZAPP0CAP1 466 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 GFAPP14136 432 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 CRHR1P34998 444 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 HSD17B2P37059 387 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 SHC2P98077 582 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 KCNAB1Q14722 419 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PFKFB4Q16877 469 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 TNFAIP8L3Q5GJ75 292 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 SULT1C3Q6IMI6 304 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PDPRQ8NCN5 879 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 WDR48Q8TAF3 677 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PHF21BQ96EK2 531 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 MOCOSQ96EN8 888 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 OR4K3Q96R72 315 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 MRPL57Q9BQC6 102 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 MRPL46Q9H2W6 279 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 SLC6A20Q9NP91 592 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 CUEDC1Q9NWM3 386 aaPredicted RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 SLC17A7Q9P2U7 560 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PTBP2Q9UKA9 531 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
PDLIM7-212ENST00000504380 A0A0J9YY10 115 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 A0A1W2PNU3 283 aaPredicted RBP12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 TLCD2A6NGC4 264 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 ZNF839A8K0R7 811 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 TARM1B6A8C7 271 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 CCNT2O60583 730 aaKnown RBP12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 WDR47O94967 919 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 SIX3O95343 332 aaPredicted RBP12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 PROCP04070 461 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 GSTA1P08263 222 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 CDK4P11802 303 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 HGFP14210 728 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 NPPBP16860 134 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 CCT5P48643 541 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 ZIC1Q15915 447 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 CLPPQ16740 277 aaPredicted RBP12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 SLC5A12Q1EHB4 618 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 FOXR1Q6PIV2 292 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 TMPRSS7Q7RTY8 843 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 ARHGAP22Q7Z5H3 698 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 CROCCP2Q86T23 111 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 THOC6Q86W42 341 aaKnown RBP12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 TMPRSS12Q86WS5 348 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 FBXO39Q8N4B4 442 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 DCBLD1Q8N8Z6 715 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 OR2L3Q8NG85 312 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 ATL1Q8WXF7 558 aa12.78□□□□□ -0.36
PDLIM7-212ENST00000504380 PGM2Q96G03 612 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms